Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1977 ATGGAACAGATTGATGCAGGAGAGAAGACGATGGACAATTCATACTCATGGAAACCCAGAAAGGGTGGTTTGAGAACCATGATCTTCATCATAGGTACACTACTCTGCTTCATTCATATAGTTGAACACAGGTCACTAACCCTTATTTTCTATGCTTCTTTTCGTGATCCTCTTTATTTGCTTGGTGGGATTGGGAATGCAGTAAATGAGTCTTTTGAGAAGATGGCGAGTTATGGGATTGTGCCTAATATGATATTGTACTTGAAGAATGAATATCACGTGCAAACTGCAACTGCCGCAAGCATTCTCTTCGCTTGGTCCTCCATTTCTAATGGCATGGCCATTTTAGGGGCTTTCCTCTCGGATTCGTACTTGGGTCGGTTTCGGGTCATCCTTATCGGATCTGTCTCCAGTCTTCTTGGGATGACTCTTTTGTGGTCAACTGCCATGATTCCCGAGCTAAGACCTCCTTCCTGTGAATCATCCAACCAAAGCTGCAACTCTGCCACGCCAGCTGAACTGGCTCTCTTACTCATTTCCTTTGGGTTAATTTCCATTGGAGCAGGTTGCATTAGACCATGCTCCATAGCATTTGGAGCAGATCAATTACAAATGAAACAAAATCCTAACAATAACAGAATCTTGAATAGCTACTTCCATTGGTATTTTGCTTCCTGTGGAATATCAGACCTTCTTGCTTTCAGCATTCTTGTCTACGTTCAAGAAAACCTCGGTTGGAAGGTGGGGTTTGGAGTGCCTGCACTGCTCATGCTCTTGTCTGCTGCAGTTTTCGTGGTTGGTTCTCCATACTACATCAAAGTGAAGCCAGGGAAAAACTTGATTACTAGTTTTGTTCAAGTACTTGTGGTCGCCTTCAAAAACAGAAAACTTAGCCTTGGTCCTCTTAACGTTGATGATCACTATTATCATACCTGTGGTTCACAGATCCTTGCCCCTACAGATAGCCTAAGGTTCTTAAACAAAGCTTGCGTGGTAAGAGATGGCGAGAGAGAGTTGAATCCAGATGGATCAGCTTCAAACTCATGGACCTTATGCACAGTGGAACAAGTGGAGTCACTGAAAGCTTTACTTAAAGTAATTCCACTGTGGTCCACAGGCATCGTTTTCATGATGATTTCCATGAACCTGGGCTCATTCAACACCATTCAATCAAACACAATGGACAGAACCATATTTGGCAACCTTAAGATTCCTGCTGGATCCTTCGTTGTCTTTATGATAGTAACCTTAACAATATGGATTGCTTTCTACGACCGCATAATAGTTCCTTTACTATCAAAATACACTGGCCAACCTAGAGGACTTAGTTGTAAGGTTCGAATGGGAATAGGGCTATTGATCGCCTGTGCATCGACGACCACGTCTGCTATAGTTGAAGCCATAAGAAGAAGAGCAGCCATTGAAGAAGGCTTGGATAAGGAACCTGATAGTGCGCTTGAAATGTCTGCCTTGTGGCTAGTTCCAGCACAAGCCTTGATGGGGTTGGCTCAGGCTTTCAATGCGATTGGACAGCTGGAGCTTTTCTACACTAGTCTTGCAAAGAGCATGCCCAGTTTTGCCATGGCTATTCAAAGCCTTCAGCTTGCTGTGGCTGCCATTGTAGGGAGCTTGCTGGTGGATGTTGTGGATAAGGTCACAAGTAAAGGAGGCACAGAAAGCTGGTTATCTAGCAACATTAACAGGGGTCACTTGGATTATTATTATGGATTTCTTACTTTCTTGGGATTAATCAACTTCATCTACTTTCTTGTTTGTTCTTCAGCTTACGGGCCTATTCAGGAGGACATGCCTGGAGCTTTGGAGGTCACTGAAGATGATAAATTTGATTACGTGGAGTTACATTCCTCCTAA 1872 0.4343 MEQIDAGEKTMDNSYSWKPRKGGLRTMIFIIGTLLCFIHIVEHRSLTLIFYASFRDPLYLLGGIGNAVNESFEKMASYGIVPNMILYLKNEYHVQTATAASILFAWSSISNGMAILGAFLSDSYLGRFRVILIGSVSSLLGMTLLWSTAMIPELRPPSCESSNQSCNSATPAELALLLISFGLISIGAGCIRPCSIAFGADQLQMKQNPNNNRILNSYFHWYFASCGISDLLAFSILVYVQENLGWKVGFGVPALLMLLSAAVFVVGSPYYIKVKPGKNLITSFVQVLVVAFKNRKLSLGPLNVDDHYYHTCGSQILAPTDSLRFLNKACVVRDGERELNPDGSASNSWTLCTVEQVESLKALLKVIPLWSTGIVFMMISMNLGSFNTIQSNTMDRTIFGNLKIPAGSFVVFMIVTLTIWIAFYDRIIVPLLSKYTGQPRGLSCKVRMGIGLLIACASTTTSAIVEAIRRRAAIEEGLDKEPDSALEMSALWLVPAQALMGLAQAFNAIGQLELFYTSLAKSMPSFAMAIQSLQLAVAAIVGSLLVDVVDKVTSKGGTESWLSSNINRGHLDYYYGFLTFLGLINFIYFLVCSSAYGPIQEDMPGALEVTEDDKFDYVELHSS 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1977 623 Gene3D MFS general substrate transporter like domains 2 603 IPR036259 -
Dere05g1977 623 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 21 596 - -
Dere05g1977 623 CDD MFS_NPF1_2 67 596 - -
Dere05g1977 623 Pfam POT family 128 562 IPR000109 GO:0016020|GO:0022857|GO:0055085
Dere05g1977 623 SUPERFAMILY MFS general substrate transporter 77 592 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1977 Dere-ChrDere05 29716011 29718600 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1977 69 603 Organic Solute Cotransporters AT1G52190 49.631 0.0 558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0634 04 6339335 6341892 Dere05g1977 05 29716011 29718600 CCT