Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1966 ATGGCTGAAGAAGTCATTGCTACTCCACCATCATCTTCTTCTGAGTATGATCTCGTGGATGATCCTGAGCTCCTAAGAACTGTCAGAGCCTCATCCAGCCGCCCAAGTCCATGGATTGAACCTGAGAGGTTGAAACTTAGACACAGAATTGGCCGGGGACCCTTCGGTGATGTTTGGCTGGCAACTCATCATCAGTCAACAGCTGATTATGATGAGTTCCATGAAGTTGCTGCCAAGATGTTGTATCCAATCAAAGAGGATAGCATCAGGATTGTATTAGAGAGATTTGACGAATTATATTATAAGTGCCAAGGAGTGGCCAGGGCTTGCTGGCTTCATGGAATTTCCATTTTAAGTGGAAGGATATGCCTCATTATGAATTTCTATGAGGGTTCAGTTGGTGACAAAATGGCTAGGCTCAGAGAAGGAAGGATTTCATTGCTTGATGTGTTGAGGTATGGCATCAATCTGGCTCAAGGTATTCTGGAACTTCATTCAAAAGGGATCCTAATTCTCAACCTTAAACCATTTAATGTGCTTCTTGATACTAATGACCAAGCAATTTTGGGAGATTTTGGTATTCCCAGTCTTCTGCTTGGCTTCTCATTCCCAAGCTCAGATATGGCTCACAGGCTCGGGACTCCAAACTACATGGCTCCAGAACAATGGCAACCTGAAGTCAGAGGCCCTATATCGTTTGAGACAGATTCATGGGGATTTGGGTGCACCATTGTGGAAATGTTGACTGGTAATCAACCTTGGTATGGTAGATCTGTGGGTGACATATACCAATTAGTAGTTAGAAAGCATGAAAAACCTCATATTCCCAGTGGCCTTCCTTCTACAATTGAGAATATCCTCAGTGGATGCTTTGAGTATGATTTAAGAAACCGTCCTTTAATGGCAGAAATTCTGAGCGTATTTAAAAGCTCTCTGGATGCATTAGCCAATGATGGAGGATGGCAATATCTTGGAACCATGAAAGTTGCTGAAAAATCAAGTAGCACTGGCTATACTGATTGGTTTCTTTCAAAGGATCGTCTTCTAGTGAATGACACGGTACGATCTAGAAAACCAATCAACTCTTGCAAACCTCAAAATATGGATGTACCAGAAGGAACTGTTGTTGGTTTAGAACGTGGTGCAGATCATGCTTTTGTTTTAGTGAGGATCCATGGGATTCATGACCCTTTAAGGATTCATACTTCAACTCTGGAGCGTGTCACATTTGGTTTGGCAGCTGGAGATTGGGTACGCTTAAAGGAAGAATGTGAGAAGCACTCCCCAGTGGGTATTCTACATTCCATCAGCCGTGATGGTAGAGTGGCTGCTGGATTTATTGGGCTGCAGACTCTTTGGAGAGGTAATTTTTCAGAACTTGAAATGGCAGAGTCTTACTGTGTGGGGCAGTTTGTAAGGCTGAAAGTCAATGTTTTGAGTCCTCGATTTGAATGGCCTCATAAGAGGGGAGGAGCCTGGGCTACTGGCAGGATATCGTGGATCCTACCAAATGGGTGTTTAGTTGTCAAATTCCCAGGCATGTTGACTTTTGGAGATGAATCGAGCACCTTCTTAGCTGATCCGTCTGAGGTTGAAGTGGTTAACTTTAATACTTGCCCCGGGATGATAGAGAAGTATCAACATGTAGAGGATCATCACTGGGTAGTTAGACCTCTCCTAATTGCATTTGGCCTGTTTACAGCTGTGAAACTAGGCATGTCAATAGGAAAGATAATGGGGAGGAATATGAGGAAGAATGCAAAAGAGAGTGAAAATCAAAGTATAGATGGCCAGCATGCTAGCAACTCTGCATGGAGATCTTCTGGTGCTATAAATCCTGGTAACACAGCATGGGTTCCTTCAGTTGCTAATATTCTTTTCAGAGAAGGTGTTAATGCCCCCCCTGGTCGGTAG 1914 0.4347 MAEEVIATPPSSSSEYDLVDDPELLRTVRASSSRPSPWIEPERLKLRHRIGRGPFGDVWLATHHQSTADYDEFHEVAAKMLYPIKEDSIRIVLERFDELYYKCQGVARACWLHGISILSGRICLIMNFYEGSVGDKMARLREGRISLLDVLRYGINLAQGILELHSKGILILNLKPFNVLLDTNDQAILGDFGIPSLLLGFSFPSSDMAHRLGTPNYMAPEQWQPEVRGPISFETDSWGFGCTIVEMLTGNQPWYGRSVGDIYQLVVRKHEKPHIPSGLPSTIENILSGCFEYDLRNRPLMAEILSVFKSSLDALANDGGWQYLGTMKVAEKSSSTGYTDWFLSKDRLLVNDTVRSRKPINSCKPQNMDVPEGTVVGLERGADHAFVLVRIHGIHDPLRIHTSTLERVTFGLAAGDWVRLKEECEKHSPVGILHSISRDGRVAAGFIGLQTLWRGNFSELEMAESYCVGQFVRLKVNVLSPRFEWPHKRGGAWATGRISWILPNGCLVVKFPGMLTFGDESSTFLADPSEVEVVNFNTCPGMIEKYQHVEDHHWVVRPLLIAFGLFTAVKLGMSIGKIMGRNMRKNAKESENQSIDGQHASNSAWRSSGAINPGNTAWVPSVANILFREGVNAPPGR 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1966 637 Gene3D Transferase(Phosphotransferase) domain 1 41 345 - -
Dere05g1966 637 CDD STKc_PknB_like 45 310 - -
Dere05g1966 637 ProSiteProfiles Protein kinase domain profile. 44 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1966 637 PANTHER OS06G0639500 PROTEIN 1 632 - -
Dere05g1966 637 SUPERFAMILY Protein kinase-like (PK-like) 41 307 IPR011009 -
Dere05g1966 637 MobiDBLite consensus disorder prediction 586 607 - -
Dere05g1966 637 Pfam Protein tyrosine and serine/threonine kinase 44 306 IPR001245 GO:0004672|GO:0006468
Dere05g1966 637 MobiDBLite consensus disorder prediction 593 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1966 Dere-ChrDere05 29575260 29578324 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1966 118 310 MAP Kinase Kinase Kinase AT3G22750 27.692 2.42e-19 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Dere05g1966 PK_Tyr_Ser-Thr 5.6e-28 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1966 05 29575260 29578324 Dere05g1966 05 29575260 29578324 ECH