Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1965 ATGTTTGCGGAAGAGAATGGTTTAAAGGGAGACCCAAGGCTGCAAGCCATCTCGGAAGCCATTAGAGTGGTGCCTCACTTCCCAAAAGAAGGAATCATGTTTCAGGACATAACGACATTGTTGTTGGATCACAAGGTCTTTAAAGATGCTATCGATATTTTTGTCGATCGTTACAGAGACATGGATATTTCCGCTGTTGCCGGAGTGGAAGCTCGAGGATTCTTGTTTGGTCCTTTAATTGCGCTGGGCATCGGTGCAAAGTTTATTCCTTTACGCAAACCTCGAAAGCTCCCAGGTGAAGTCATATCAGAAAAATATGTTCTTGAATATGGAACTGATTGTTTGGAGATGCATGTTGGGGCTGTTCGGCCCGGTGAACGGGCTATAGTTATTGATGATTTGGTTGCTACGGGTGGAACTCTGTCAGCTGCAATACGACTATTAGAACGTGTTGGTGCTGAAGTTGTTGAATGTGCTTGTGTGGTTGGTGTGCCTGAGGTTAAGGGACACTGCAGGCTTAATGGAAAGCCACTGTATGTCCTTGTGGAGCCGCGTCAAATGGATGATCGCTTATGA 576 0.4566 MFAEENGLKGDPRLQAISEAIRVVPHFPKEGIMFQDITTLLLDHKVFKDAIDIFVDRYRDMDISAVAGVEARGFLFGPLIALGIGAKFIPLRKPRKLPGEVISEKYVLEYGTDCLEMHVGAVRPGERAIVIDDLVATGGTLSAAIRLLERVGAEVVECACVVGVPEVKGHCRLNGKPLYVLVEPRQMDDRL 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1965 191 SUPERFAMILY PRTase-like 20 177 IPR029057 -
Dere05g1965 191 CDD PRTases_typeI 50 183 IPR000836 -
Dere05g1965 191 NCBIfam adenine phosphoribosyltransferase 18 182 IPR005764 GO:0003999|GO:0005737|GO:0006168
Dere05g1965 191 FunFam Adenine phosphoribosyltransferase 1 5 184 - -
Dere05g1965 191 Hamap Adenine phosphoribosyltransferase [apt]. 17 184 IPR005764 GO:0003999|GO:0005737|GO:0006168
Dere05g1965 191 Gene3D - 6 184 IPR029057 -
Dere05g1965 191 Pfam Phosphoribosyl transferase domain 44 166 IPR000836 -
Dere05g1965 191 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 9 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1965 Dere-ChrDere05 29563886 29566409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1965 11 183 PRT Gene Family AT1G27450 71.098 3.50e-89 257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1965 05 29563886 29566409 Dere04g0547 04 5497702 5499662 CCT
Dere05g1965 05 29563886 29566409 Dere05g1965 05 29563886 29566409 ECH
Dere04g0547 04 5497702 5499662 Dere05g1965 05 29563886 29566409 ECH