Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1922 ATGGCAAAGTGTCACCGGAACAACGTCGGATCTCTGGTTCTCGACCATCACGATCCTACCAGGAGTGCAACAGTCGGCGGACACTTCCGCATTTGGAATGCCTTGTCCGCTTCCTCAATTCGCCGTATCATTTTTGACGCCGTCAGCTGCGGCGGTGGCTCTCGGCATCACCGCCAACACAATGACTTTGCATCCTCCGCCTCAACGACAACATCGGCCTCCAAGAACTCGGAGGATAAGTCGCAAAAACAGAGACAGGGAACCTCCAAGTGTCAGCCGAAACCGAATGCGAGGTCGGAGAAACTATCGGATCTTCTGAATATGGCGGAGTCTGAAATTGACACCGACACTAAGCAGAGGGAAGAGGTGTTGGAGGAGCTGAAGAGAATTGTCAAGGAGTTGCAGAGTGAGGATTTGACTAAACGGCAAATGGCTGCGGCTAGCGTGAGATTGCTCGCGAAGGAAGACTTGGAAGTCAGAGGGACACTTGCCATGCTTGGAGCGATTCCTCCTCTGGTTGGAATGCTTGATTTGGAAGATGTTAGTTCTCAGATCTCTTCGCTATATGCTTTACTCAATCTCGGGATCGGCAACGACGCAAATAAAGCAGCCATTGTCAAAGTTGGTGCTGTTCACAAGATGCTAAAGCTCATTGAATCACCAAATACTCCAGATTCATCCGTCTCTGAAGCAATTGTTGCAAACTTCCTTGGCTTGAGTGCTTTCGATTCGAACAAACCAGTAATCGGATCCTCGGGTGCGATACCATTCCTGTTTAGAACCCTGGAAAATTTAGATAATAAAACTAGCCTCCAAGCCAAGCAAGATGCTCTCCGTGCACTTTACAATCTTTCAATCTTCCCAAGCAATATCTCGTTCATATTGGAAACAGATTTGGTTCCATTTCTGATAAACGCAATAGGAGATATGGAAGTGAGTGAAAGAATTCTCTCAATCCTAAGCAATTTGGTATCAGCCCCAGAGGGTCGAAAAACTGTAAGTGCAGTGCGCGATGCATTCCCCATTCTGATTGATGTATTGAATTGGACAGATTCACCCGGATGCCAGGAAAAAGCATCATATATTTTGATGATTATGGCCCATAAAGCCTATGGCGACAGGCAGGCCATGATTGAGGCAGGGATTGTTTCATCACTGCTTGAGTTGATGCTTCTGGGTACCGCATTGGCACAGAAAAGGGCCTCGAGGATATTGGAATGCTTGAGGATTGACAAAGGGAAGCAGGTATCTGGGAGTTGCAGTGGAAACTTTAGTTCAACTGTTTCTGCTCCCATATGTGGCTCTTCGTCATCTTGTACAAAGCCAGACGGAGGTGGAAAAGAGTGTTTGGTGGAGGAGGAAGATATGATGAGCGACGAGAAGAAAGCAGTGAAGCAATTAGTGCAGCAGAGTTTGCAAAATAACATGAGGAAAATGGTGAAGAGGGCCAACTTGCCTCAAGATTTCGTTCCATCCGAGCATTTTAAGTCACTCACTTCAAGTTCGACTTCAAAGAGCCTGCCATTTTGA 1530 0.4686 MAKCHRNNVGSLVLDHHDPTRSATVGGHFRIWNALSASSIRRIIFDAVSCGGGSRHHRQHNDFASSASTTTSASKNSEDKSQKQRQGTSKCQPKPNARSEKLSDLLNMAESEIDTDTKQREEVLEELKRIVKELQSEDLTKRQMAAASVRLLAKEDLEVRGTLAMLGAIPPLVGMLDLEDVSSQISSLYALLNLGIGNDANKAAIVKVGAVHKMLKLIESPNTPDSSVSEAIVANFLGLSAFDSNKPVIGSSGAIPFLFRTLENLDNKTSLQAKQDALRALYNLSIFPSNISFILETDLVPFLINAIGDMEVSERILSILSNLVSAPEGRKTVSAVRDAFPILIDVLNWTDSPGCQEKASYILMIMAHKAYGDRQAMIEAGIVSSLLELMLLGTALAQKRASRILECLRIDKGKQVSGSCSGNFSSTVSAPICGSSSSCTKPDGGGKECLVEEEDMMSDEKKAVKQLVQQSLQNNMRKMVKRANLPQDFVPSEHFKSLTSSSTSKSLPF 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1922 509 MobiDBLite consensus disorder prediction 54 104 - -
Dere05g1922 509 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 23 509 - -
Dere05g1922 509 MobiDBLite consensus disorder prediction 1 20 - -
Dere05g1922 509 MobiDBLite consensus disorder prediction 63 77 - -
Dere05g1922 509 Gene3D - 270 426 IPR011989 -
Dere05g1922 509 Coils Coil 106 137 - -
Dere05g1922 509 Coils Coil 450 470 - -
Dere05g1922 509 Gene3D - 99 269 IPR011989 -
Dere05g1922 509 SMART arm_5 156 196 IPR000225 GO:0005515
Dere05g1922 509 SMART arm_5 369 410 IPR000225 GO:0005515
Dere05g1922 509 SMART arm_5 287 325 IPR000225 GO:0005515
Dere05g1922 509 SMART arm_5 242 286 IPR000225 GO:0005515
Dere05g1922 509 SMART arm_5 198 241 IPR000225 GO:0005515
Dere05g1922 509 SUPERFAMILY ARM repeat 126 413 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1922 Dere-ChrDere05 29182194 29184273 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1922 122 409 U-box Gene Family AT2G23140 32.180 9.12e-31 124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1922 05 29182194 29184273 Dere04g0506 04 5115945 5117968 CCT