Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1915 ATGGAGGCAAATAGTACAGTGTTTGGGCGGTATGAAATGGGAAGGCTTCTGGGGAAAGGCACTTTCGCTAAAGTCTATCACGGCAAGAACGTAGCCACGGGCGAGAGCGTTGCCATCAAAGTGATAAGCAAAGAGAAAGTGAAGAGAGAGGGGATGATGGAGCAGATCAAGCGCGAGATTTCCGTCATGCGATTGGTTCGACACCCCAACGTTGTTGAGCTCAAAGAGGTGATGGCTACCAAGACGAAGATCTTCTTTGTCATGGAGTATGTTCGAGGGGGCGAGCTCTTCGCCAAGGTGGCAAGAGGCAAACTCAAGGAGGATCTGGCCCGTAAGTACTTCCAAAAGTTAATCAGCGCCGTCGATTTCTGTCACAGCAGAGGGGTCTCTCACCGAGATCTCAAGCCTGAGAATTTGTTACTCGACGACAAAGAGAATCTCAAAATCTCCGATTTTGGCCTCTCGGCGTTGCCGGAACAGCTCCGGTACGACGGCCTCCTCCACACCCAGTGCGGTACTCCGGCATATATTGCCCCTGAAGTTTTGAGAAAGAAAGGGTACGATGGATCGAAAGCTGATATTTGGTCCTGTGGGGTGATTCTATACGCATTATTGGCTGGATTTCTTCCTTTTCAAGATGAAAATCTTATGACTATGTACACCAAGATTTTCAAAGCCGAATTTCAATTTCCTCCATGGTTTTCTGCGGAATCAAGGAGATTGATTTCGAAGATTCTGGTGCCGGACCCCGAGAGGCGAGCCACGATACCTGCTATCATGCGGGTTCCATGGTTCCTAAAGGGGTTTTCGATCGCATCCGCATTTCACTCAGATGAAAGCGCTTCGAACAAAGCCGTTGAGGAAGATTCCAGGACCAAGCTTTCGTCGCCTAAGTTTTTCAACGCGTTCGAATTTATTTCTTCAATGTCTTCTGGATTTGATTTGTCTGGACTGTTCGAGAAAAAGAGGAAGACCGGGTCAGTGTTCACTTCCAAGTGTTCGGCTACGGTGATTATGTCCAAGATTGAGACGATGGCAAAGGGTCTGAGCTTCAAGACGGCGAAGGTGAAGGACTTCAGAATCAGGCTGGAAGGACGGTCGGAAGGGAGAAAAGGGAGGTTAAATGTGACGGCGGAGGTGTTCGAGGTGGCCCCAGAAGTCGCCGTCGTGGAGTTTTCGAAGTGTTCCGGCGACACTTTGGAATATGCCAAGTTTTGCGAGGAAGATGTTAGGCCCGCGCTGAAAGACATTGTTTGGATGTGGCAAGGTGACAGCATGTGTAACGGTAACATCACGGACGGTTCGAGAGAACAAACAATGGAACAAGTCATATGA 1335 0.4899 MEANSTVFGRYEMGRLLGKGTFAKVYHGKNVATGESVAIKVISKEKVKREGMMEQIKREISVMRLVRHPNVVELKEVMATKTKIFFVMEYVRGGELFAKVARGKLKEDLARKYFQKLISAVDFCHSRGVSHRDLKPENLLLDDKENLKISDFGLSALPEQLRYDGLLHTQCGTPAYIAPEVLRKKGYDGSKADIWSCGVILYALLAGFLPFQDENLMTMYTKIFKAEFQFPPWFSAESRRLISKILVPDPERRATIPAIMRVPWFLKGFSIASAFHSDESASNKAVEEDSRTKLSSPKFFNAFEFISSMSSGFDLSGLFEKKRKTGSVFTSKCSATVIMSKIETMAKGLSFKTAKVKDFRIRLEGRSEGRKGRLNVTAEVFEVAPEVAVVEFSKCSGDTLEYAKFCEEDVRPALKDIVWMWQGDSMCNGNITDGSREQTMEQVI 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1915 444 ProSiteProfiles NAF domain profile. 295 320 IPR018451 GO:0007165
Dere05g1915 444 FunFam Non-specific serine/threonine protein kinase 295 419 - -
Dere05g1915 444 Gene3D Transferase(Phosphotransferase) domain 1 91 270 - -
Dere05g1915 444 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
Dere05g1915 444 SUPERFAMILY Protein kinase-like (PK-like) 7 290 IPR011009 -
Dere05g1915 444 FunFam Non-specific serine/threonine protein kinase 2 90 - -
Dere05g1915 444 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Dere05g1915 444 Pfam Protein kinase domain 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1915 444 CDD STKc_SnRK3 10 264 - -
Dere05g1915 444 SMART serkin_6 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1915 444 FunFam Non-specific serine/threonine protein kinase 4 298 - -
Dere05g1915 444 Pfam NAF domain 297 355 IPR004041 GO:0007165
Dere05g1915 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Dere05g1915 444 CDD CIPK_C 301 415 - -
Dere05g1915 444 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 415 - -
Dere05g1915 444 ProSiteProfiles Protein kinase domain profile. 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1915 444 Gene3D Kinase associated domain 1, KA1 295 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1915 Dere-ChrDere05 29087290 29088624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1915 2 425 CBL-interacting serine-threonine protein kinases AT5G10930 69.655 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Dere05g1915 Pkinase 7.6e-74 CL0016