Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1898 ATGTATTTCGCCTTCATTTGCTCTTCCTGTCACTGTGGTTCTGATCTTCGTGTCTGCGAGAGAGGCCCTACCGGGCAAATAGAAATGGGCATATATCTTAGCACTCCCAAAACCGAGAAATTTTCTGAAGATGGTGAGAATGACCGTCTTAGATTTGGTTTATCATCCATGCAAGGGTGGCGTGCGACAATGGAAGATGCTCATGCTGCATATCCAGATCTCGATGCGTCCACTTCGTTTTTTGGTGTCTATGATGGTCATGGAGGTAAGGTGGTTGCAAAGTTTTGTGCTAAGTATCTTCACCAACAGGTGCTCAAGAGTGAAGCATATACAGCTGGAGATATAGGAACCTCTCTTCAGAAAGCATTTTTCAGAATGGATGAGATGATGCGTGGTCAAAGGGGATGGAGGGAATTAGCTGTCTTGGGGGATAAGCTAAACAAGTTTACTGGGATGATAGAAGGATTGATTTGGTCTCCACGAAGCAGTGATGGTAATGACCAGGTTGATGATTGGGCTTTTGAGGAGGGACCTCATTCTGATTTTGCTGGACCTACTTCAGGAAGCACTGCCTGTGTTGCAGTAATAAGAAACAACCTACTTGTTGTTGCAAATGCTGGAGATTCACGATGTGTGATATCTCGGAAGGGTCAGGCGTACAATTTATCTAGAGACCACAAACCTGATCTTGAGATTGAGAAGGAACGAATCTTAAAAGCTGGTGGTTTTATTCATGCAGGGCGAGTTAATGGCAGTTTAAATCTTGCAAGAGCCATAGGTGACATGGAATTTAAACAGAATAGGTTTCTCCCTGTTGAAAAACAAATAGTTACTGCCAATCCAGATATAAACACTGTGGAGCTTTGTGATGAAGATGAGTTTTTGGTGCTAGCTTGTGATGGAATATGGGATTGCCTGTCGAGCCAGCAATTGGTACATTATGTGCATGAACAACTGCTCTCGGAAACCAAACTCTCTACGGTGTGTGAAAGAGTACTTGATCGGTGTTTGGCACCAGCAACTGTTGGCGGTGAGGGATGTGATAACATGACAATGATCTTGGTGCTATTCAAGAAACCCACACCGTCCACTGAGCTAGCAGCAGAGCAATCCACTTCGAATGAACAAGCTGAATCTTAA 1140 0.4395 MYFAFICSSCHCGSDLRVCERGPTGQIEMGIYLSTPKTEKFSEDGENDRLRFGLSSMQGWRATMEDAHAAYPDLDASTSFFGVYDGHGGKVVAKFCAKYLHQQVLKSEAYTAGDIGTSLQKAFFRMDEMMRGQRGWRELAVLGDKLNKFTGMIEGLIWSPRSSDGNDQVDDWAFEEGPHSDFAGPTSGSTACVAVIRNNLLVVANAGDSRCVISRKGQAYNLSRDHKPDLEIEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNRFLPVEKQIVTANPDINTVELCDEDEFLVLACDGIWDCLSSQQLVHYVHEQLLSETKLSTVCERVLDRCLAPATVGGEGCDNMTMILVLFKKPTPSTELAAEQSTSNEQAES 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1898 379 Pfam Protein phosphatase 2C 181 341 IPR001932 -
Dere05g1898 379 Pfam Protein phosphatase 2C 51 131 IPR001932 -
Dere05g1898 379 SMART PP2C_4 41 355 IPR001932 -
Dere05g1898 379 CDD PP2Cc 51 357 IPR001932 -
Dere05g1898 379 SUPERFAMILY PP2C-like 31 359 IPR036457 -
Dere05g1898 379 Gene3D - 28 358 IPR036457 -
Dere05g1898 379 ProSiteProfiles PPM-type phosphatase domain profile. 51 357 IPR001932 -
Dere05g1898 379 PANTHER PROTEIN PHOSPHATASE 2C 41 355 IPR015655 GO:0004722|GO:0006470
Dere05g1898 379 ProSitePatterns PPM-type phosphatase domain signature. 80 88 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1898 Dere-ChrDere05 28910493 28923099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1898 29 363 PP2C-type Phosphatase Gene Family AT2G25070 80.299 0.0 588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1898 05 28910493 28923099 Dere05g1898 05 28910493 28923099 ECH