Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1866 ATGGCGGACGTAACGGTGATGAATGAGATTGAGGCAACAGCCTCGCGTCTTGGAGTCTATCTTTCTCCCATTGATCTGGATTTCGTTCACCTTCCCCAGGCGATGATTTTGGAATCCGGAGATGATGGCCTGTGGATGCCTGTTGATCTTGATGCTGAGAAAAGTTTAGGTCACTGCTTCATTGACTATAACACTCCTCAGTTTTGGAATGAGTTTTTTGCAATGGTCCCTCTGGGCACATACTTGGCAATAGTTCACAGCCAGGGGCTTGCTGTTTCTGGAGCAGCCATGAAGCAAGCAATCCTCGAGATGCTAATAAAGTCCTTGAAGGTTGAAAATGTAAAACATTTCATCTGGTCTCCAATTGATCCAATTCTTGCACTCTTCGTTCCTGAGATGGGTGGTGGGAACCAGCCTGCTAGGTTAAGTGCTGTTCTTAGTCTTGTTCAAATCCTTGGTAAAGAGAAGAACTCAGGCAGAAGAACCTTTTCAGTGTCAGTGATTACAAGATGTACTGGCAAAGCAATGGAGACTGCCTTCCGTTCAGTTTTGGAGCTTGAGAATATGAATGACAAGATCATTGCATTTGCTTGGGAGCCAAAAGGTCACAGGTTTGCGGTTATTCATGGTGATAACCCTAAGCCTGATATTAGCTTTTATTCTGTGTGGACTGCTCTGAACGTAGGCCAGGTTTCAAAGCCTGCTACTTTGAAAGGCAAGCAAGCAAATGCTCTTTCTAGGTCACCTGCATGTCACTTCATTATACTTGCAGGGTTGAAAGTTTTCAATGGACAATTAGAATTTTATAGTGTTGATGAGTTTGAAACCATGGTAACTGCTGAATATTTTATGGCAACATATATTGAATGGGATCCAACTGGAAGGCATGTTGCAACGTCTGTGACTTCAGTTCATGAAATGGATAACGGTTTCTATATATGGTCTTTTAATGGCAAGCTTCTCTATCGTATACTGAAGGATCATTTCTTTCAGTTGGAGACCAAGGTCACCATCTTTCCTGAGTTCAGAGAAAGAGTAAGAGATCTGAAGGACTTGAAGAAGTATAGTAAGAAATACGAAGCAAAAGACCAAGATGTGTCATTGCTGCTGAGTGAGCAGGAGTGTGAGAAGTGCCGAATGTTGCAGAAGCTTAGGGATGGTGAAGCCAGTGACGGAGAAGAGGAATACGGGGCTAAGGTAATAGAAGTTGAGGAAGTAGTGGATGCATCAGAGGGGGTCCTTCCTTTTGAATAA 1254 0.4322 MADVTVMNEIEATASRLGVYLSPIDLDFVHLPQAMILESGDDGLWMPVDLDAEKSLGHCFIDYNTPQFWNEFFAMVPLGTYLAIVHSQGLAVSGAAMKQAILEMLIKSLKVENVKHFIWSPIDPILALFVPEMGGGNQPARLSAVLSLVQILGKEKNSGRRTFSVSVITRCTGKAMETAFRSVLELENMNDKIIAFAWEPKGHRFAVIHGDNPKPDISFYSVWTALNVGQVSKPATLKGKQANALSRSPACHFIILAGLKVFNGQLEFYSVDEFETMVTAEYFMATYIEWDPTGRHVATSVTSVHEMDNGFYIWSFNGKLLYRILKDHFFQLETKVTIFPEFRERVRDLKDLKKYSKKYEAKDQDVSLLLSEQECEKCRMLQKLRDGEASDGEEEYGAKVIEVEEVVDASEGVLPFE 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1866 417 Pfam Eukaryotic translation initiation factor eIF2A 178 332 IPR013979 -
Dere05g1866 417 SUPERFAMILY DPP6 N-terminal domain-like 187 329 - -
Dere05g1866 417 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED 107 166 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Dere05g1866 417 Gene3D - 157 367 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1866 Dere-ChrDere05 28466563 28471735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1866 41 67 Eukaryotic Initiation Factors Gene Family AT5G27640 62.963 2.74e-06 47.8