Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1861 ATGGTAAGGTGTACTACCAATGTAGTTGGAGGGTGTCCCCCAGTACGCGTTCTTAATCAACACCGCGTCGTTAAAAGAGCTCTAGCGAAGATGATGCACATGACCTTTTATTGGAGCAAAAAGGTGACCCTCCTCATCGACTCATGGAAGACCCATTCATGGACGAGTTACGCCCTGAGTCTACTTGCGTGTCTTGTTGTCTCGGCTTTCTACCAGTATCTGGAGAATCGCCGCCTTCGCGTAAAGGCCATTTCCTTCGAGAGGCCGTCCCCTCCGACGCACCAGGTCCGGGTCCCTCTTCTGCAACCTAATCTCGCCGGAGACAAGGCCAAATTGCGGGTGAAGTTCGCCGGAGCTGTTCTGTATGGGGTGAATTCGGCGATCGGATATCTGTTGATGTTGGCCGTCATGTCCTTTAACGGGGGGGTCTTTGTGGCGATCGTGGTCGGTCTTGCCGTCGGCTACTTCTTTTTCAGGACTGAGGGTGAAGATCTTTCGCTTGCCGTTGGCAGTGCCTGTGCCTGTTCTTAG 531 0.533 MVRCTTNVVGGCPPVRVLNQHRVVKRALAKMMHMTFYWSKKVTLLIDSWKTHSWTSYALSLLACLVVSAFYQYLENRRLRVKAISFERPSPPTHQVRVPLLQPNLAGDKAKLRVKFAGAVLYGVNSAIGYLLMLAVMSFNGGVFVAIVVGLAVGYFFFRTEGEDLSLAVGSACACS 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1861 176 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 29 164 IPR007274 GO:0005375|GO:0016020|GO:0035434
Dere05g1861 176 Pfam Ctr copper transporter family 34 158 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1861 Dere-ChrDere05 28410729 28411558 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1861 31 176 Inorganic Solute Cotransporters AT5G20650 52.740 1.77e-51 160