Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1859 ATGACTCCAAAGAAGATTACATGGAAGTCTATCATCTTCATCCTAAGTTGTTACAAGACTAATTACCCCTTGCAGGAGAAAAAGGTTTTGAAGCAAGGTTCATTCCAGAGGCTGAGCCTCTCAGACATAAGCCATTCCAGCTCATCTCAGGCCATTGATGATCTTTCAATTTCTCTAGCTGGCTCAAAACTTCATATATTCAGCCTAGAGGAGCTTCGAGAGGCAACGCATAATTTCTCGTGGAGTAATCTTCTTGGTGAAGGCGGGTTTGGACCCGTGCACAAGGGATTTCTTGATGACAAGCTTAGGCCTAGGTTGAAAGCTCAGCCTGTAGCTGTCAAACGCCTAGACTTGGGTGGCTTGCAAGGTCATAGGGAGTGGCTGGCAGAGATTATCTTTCTTGGACAGCTGCAGCATCCACATCTTGTAAAGTTAATTGGGTACTGTTATGAGGATGAGCATAGGCTTTTGGTGTATGAATACATGCCAAGAGGAAGCTTGGAGAATCAGCTCTTCAGAAGATACTCTGCTGCCTTGCCATGGTCAACCAGGATGAAAATTGCATTAGGTGCGGCTAAGGGCCTAGCCTTCCTTCACGAAGTAGATAAACCAGTAATATACAGAGATTTCAAAGCCTCAAATATCTTACTAGATTCGGATTACACAGCTAAGCTGTCAGATTTCGGGCTGGCTAAGGATGGCCCGGAAGGGGAAGAGACACATGTGACAACACGCGTAATGGGAACACAGGGCTATGCTGCTCCTGAGTATGTCATGACAGGTCATCTTACAACAAAGAGCGACGTGTATAGCTTTGGAGTGGTTCTGTTAGAATTGCTGACAGGGAAAAGGGTGGTGGATAAGAACAGGCCAAGTAGAGAGCATAGCCTGGTGGAGTGGGCAAGGCCGATGTTGAGGGATCAGAGAAAATTGTATCAAGTTATAGATCCCAGACTGGAAGGCCAATTTCCATCGAGAGGAGCTCGAAAGGTGGCTACCTTAGCTTACAAATGCTTGAGTCAGCACCCAAATCCAAGGCCCACCATGAGTGAAGTGGTCAGGATATTGGAGTCACTTCAGGATTTTAACGATGTTTTAATAGGACCATTTGTTTATGTTGCCGTAAGTGAAGGCCAAAAAGGAACATGA 1149 0.456 MTPKKITWKSIIFILSCYKTNYPLQEKKVLKQGSFQRLSLSDISHSSSSQAIDDLSISLAGSKLHIFSLEELREATHNFSWSNLLGEGGFGPVHKGFLDDKLRPRLKAQPVAVKRLDLGGLQGHREWLAEIIFLGQLQHPHLVKLIGYCYEDEHRLLVYEYMPRGSLENQLFRRYSAALPWSTRMKIALGAAKGLAFLHEVDKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVTTRVMGTQGYAAPEYVMTGHLTTKSDVYSFGVVLLELLTGKRVVDKNRPSREHSLVEWARPMLRDQRKLYQVIDPRLEGQFPSRGARKVATLAYKCLSQHPNPRPTMSEVVRILESLQDFNDVLIGPFVYVAVSEGQKGT 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1859 382 ProSiteProfiles Protein kinase domain profile. 79 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1859 382 FunFam Serine/threonine-protein kinase BIK1 46 161 - -
Dere05g1859 382 CDD STKc_IRAK 85 359 - -
Dere05g1859 382 FunFam Probable serine/threonine-protein kinase PBL8 162 370 - -
Dere05g1859 382 PANTHER OS01G0588500 PROTEIN-RELATED 49 360 - -
Dere05g1859 382 Gene3D Transferase(Phosphotransferase) domain 1 162 366 - -
Dere05g1859 382 SUPERFAMILY Protein kinase-like (PK-like) 55 357 IPR011009 -
Dere05g1859 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Dere05g1859 382 Pfam Protein tyrosine and serine/threonine kinase 82 356 IPR001245 GO:0004672|GO:0006468
Dere05g1859 382 Gene3D Phosphorylase Kinase; domain 1 39 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1859 Dere-ChrDere05 28401526 28403148 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1859 65 356 Glycoside Hydrolase AT3G07070 53.559 7.57e-105 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dere05g1859 PK_Tyr_Ser-Thr 2e-49 CL0016