Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1851 ATGGCATTCCGGCTAGCGTTTGTTCTTCTGGCTTTTTTCATTTGTTTGAACATCAATTCGGTGGAGTCAGACGATGGAGCAACATTGCTAGAGATAAAGAAGTCGTTCAGGGATGTGGATAATGTTCTATATGACTGGACTGACTCTCCATCTTCCGATTATTGTGTCTGGAGAGGGGTCAACTGTGATAATGTCACCTTCAATGTCATTGCACTCAACCTTTCAAGTTTAAATCTTGACGGCGAAATCTCACCTGCAATAGGAGGCCTCAAGAGCTTGGTTTCTATTGACCTGAGGGGAAACCGTCTATCAGGCCAGATACCGGATGAGATTGGGGACTGTTCTTCTTTGAAGAGCTTGGACTTGTCATTCAATGAGATACGGGGAGACATACCATTTTCCATTTCAAAGTTGAAACAACTGGAAAACCTAATTTTGAAAAATAATCAGTTAATAGGACCAATTCCTTCAACCTTGTCTCAGATTCCCAACTTGAAGATTCTAGACCTGGCACAAAACAATCTTAGCGGTGAAATACCAAGGCTTATATACTGGAACGAAGTTCTGCAGTATCTTGGCTTGCGGGGGAACAATTTAGTGGGTTCGCTCTCTCCAGACATGTGCCAGTTAACTGGGTTATGGTACTTTGATGTAAGGAACAACAGCTTGACTGGGAGCATTCCGGAAAGTATAGGCAACTGTACTGCCTTCCAGGTCTTGGATTTATCCTACAACCAGCTGACTGGAAAGATACCGTTCAATATTGGGTTTCTCCAAGTAGCAACATTGTCATTGCAAGGCAATCAACTCTCTGGGCATATTCCATCGGTAATCGGGCTGATGCAAGCACTTGCTGTCTTAGACTTGAGTTGTAATATGTTAAGTGGACCAATCCCTCCTATCTTGGGAAATTTGACTTACACAGAAAAATTGTATTTGCATGGGAATAAGCTGACTGGTCCCATACCCCCAGAGCTTGGAAATATGACAAAGCTTCATTATTTGGAACTCAATGATAACCGTTTAAGTGGATATATCCCCCCTCAGCTAGGAAAACTTACCGACCTGTTTGATTTAAATGTAGCTAACAACAACCTTGAGGGGCCAATTCCTGATGATATTAGCTCATGCAAGAATCTCAACAGCCTCAATGTGCATGGAAACAAGTTGAATGGAACAATCCCCCCAACTTTCCAGAGCTTGGAGAGTATGACATATCTAAATCTTTCATCCAACAAGCTTCATGGCTCCATTCCAATTGAGCTGTCACGGATTGGTAATTTGGATACATTGGATATTTCAAATAATAATATAAGTGGGTCCATTCCTTCTTCCCTTGGTGACTTAGAACATCTTCTGAAGCTGAATCTGAGCAGAAATCATCTAACTAGCTTTATTCCAGCTGAGTTTGGTAATTTGAGAAGTGTTATGGATATAGATCTTTCAAATAATCAACTCTCTGGCTTGATTCCTGAAGAACTTAGTCAGCTTCAGAATATGATATCCCTGAGACTGGAAAACAACAACCTATCTGGGGATGTGACTTCACTTATTAATTGCCTCAGTCTTTCTTTACTTAATGTGTCCTATAACAACCTAGTTGGTGTTATTCCCACAAGCAATAATTTCTCCAGGTTTTCCCCTGACAGTTTCATTGGAAACTCGGGTCTTTGTGGCTATTGGATGACTTTGCCATGTCATGGATCTCACCCCACAGAGCGAGTTACGTTATCTAAGGCAGCTATCCTTGGAATTGCTCTTGGTGCCCTTGTGATTCTTCTCATGATATTACTGGCAGCTTGTCGGCCATACAATCCATCCCCTTTTCTTGATGGATCACTTGACAAACCAGTTAATTACTCACCACCAAAGCTAGTGATTCTTCATATGAATATGGCTCTTCATGTGTATGAGGATATCATGAGGATGACCGAAAACCTGAGTGAGAAGTACATAATTGGATATGGTGCATCAAGCACTGTGTACAAATGCGTCCTTAAGAATTGCAAGCCAGTAGCTATCAAGAGGCTTTATTCTCACTATCCCCAATGCTTGAAAGAATTCGAGACTGAACTTAAGACAGTTGGTAGCATCAAGCACCGAAACCTAGTTTGTCTCCAAGGTTATTCCTTGTCACCTTACGGGAACCTTCTCTTCTATGACTACATGGAAAATGGCAGTCTATGGGATCTTCTTCATGGTGCTTCTAAGAAGAAAAAACTTGACTGGGATCTTCGTTTAAAAATAGCACTTGGAGCAGCACAAGGGCTTGCTTATCTACACCATGATTGCTGTCCCCGTATCATCCACAGGGATGTGAAATCATCAAATATTCTGTTGGACAAGGACTTTGAGGCCCATTTAACTGACTTTGGCATTGCTAAAAGTCTATGCCCCTCAAAGTCCCACACTTCAACTTACATAATGGGCACAATAGGTTATATAGACCCTGAGTATGCTCGAACTTCACGCCTTACTGAGAAGTCTGATGTCTATAGTTATGGCATCGTTTTACTTGAGTTGCTCACTGGCAGGAAAGCCGTGGACAATGAATCCAATCTCCATCACCTGATCATGTCAAAGACGGCAAACAATGCTGTTATGGAGACGGTTGATCCTGATATTACTGCCTCTTGTAAGGACCTAGGAGCAGTAAAGAAGTTATTTCAGCTTGCCCTTTTGTGCACAAAGAGACAGCCAGTTGATAGGCCGACAATGCATGAGGTGACACGTGTGCTGGGAAGCCTTGTGCCACCCCAGTCCCCACCAAAACAAGCAGCCCCACTACCTGCTGCTGCTTTACTTCCATCTGCCAAGGCGCCATCTTGCTATGTGGATGAGTATGCAAATCTGAAAGCTCCACACTTGGTGAACTGCCCCTCCATGAGCACCTCTGATGCCCAGCTCTTCCTCAAATTTGGAGAGGTAATTTCTCAGAACAGTGAATGA 2949 0.4273 MAFRLAFVLLAFFICLNINSVESDDGATLLEIKKSFRDVDNVLYDWTDSPSSDYCVWRGVNCDNVTFNVIALNLSSLNLDGEISPAIGGLKSLVSIDLRGNRLSGQIPDEIGDCSSLKSLDLSFNEIRGDIPFSISKLKQLENLILKNNQLIGPIPSTLSQIPNLKILDLAQNNLSGEIPRLIYWNEVLQYLGLRGNNLVGSLSPDMCQLTGLWYFDVRNNSLTGSIPESIGNCTAFQVLDLSYNQLTGKIPFNIGFLQVATLSLQGNQLSGHIPSVIGLMQALAVLDLSCNMLSGPIPPILGNLTYTEKLYLHGNKLTGPIPPELGNMTKLHYLELNDNRLSGYIPPQLGKLTDLFDLNVANNNLEGPIPDDISSCKNLNSLNVHGNKLNGTIPPTFQSLESMTYLNLSSNKLHGSIPIELSRIGNLDTLDISNNNISGSIPSSLGDLEHLLKLNLSRNHLTSFIPAEFGNLRSVMDIDLSNNQLSGLIPEELSQLQNMISLRLENNNLSGDVTSLINCLSLSLLNVSYNNLVGVIPTSNNFSRFSPDSFIGNSGLCGYWMTLPCHGSHPTERVTLSKAAILGIALGALVILLMILLAACRPYNPSPFLDGSLDKPVNYSPPKLVILHMNMALHVYEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQCLKEFETELKTVGSIKHRNLVCLQGYSLSPYGNLLFYDYMENGSLWDLLHGASKKKKLDWDLRLKIALGAAQGLAYLHHDCCPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCPSKSHTSTYIMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKAVDNESNLHHLIMSKTANNAVMETVDPDITASCKDLGAVKKLFQLALLCTKRQPVDRPTMHEVTRVLGSLVPPQSPPKQAAPLPAAALLPSAKAPSCYVDEYANLKAPHLVNCPSMSTSDAQLFLKFGEVISQNSE 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1851 982 Gene3D Ribonuclease Inhibitor 185 258 IPR032675 -
Dere05g1851 982 Gene3D Transferase(Phosphotransferase) domain 1 723 923 - -
Dere05g1851 982 SUPERFAMILY Protein kinase-like (PK-like) 624 913 IPR011009 -
Dere05g1851 982 SUPERFAMILY L domain-like 48 257 - -
Dere05g1851 982 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 297 569 - -
Dere05g1851 982 ProSiteProfiles Leucine-rich repeat profile. 427 450 IPR001611 GO:0005515
Dere05g1851 982 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 187 296 - -
Dere05g1851 982 SUPERFAMILY RNI-like 203 536 - -
Dere05g1851 982 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 618 722 - -
Dere05g1851 982 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 161 914 - -
Dere05g1851 982 Pfam Leucine rich repeat 92 151 IPR001611 GO:0005515
Dere05g1851 982 Pfam Leucine rich repeat 427 486 IPR001611 GO:0005515
Dere05g1851 982 Gene3D Phosphorylase Kinase; domain 1 620 722 - -
Dere05g1851 982 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 22 186 - -
Dere05g1851 982 SMART LRR_typ_2 329 353 IPR003591 -
Dere05g1851 982 SMART LRR_typ_2 210 234 IPR003591 -
Dere05g1851 982 SMART LRR_typ_2 449 472 IPR003591 -
Dere05g1851 982 SMART LRR_typ_2 401 425 IPR003591 -
Dere05g1851 982 SMART LRR_typ_2 162 186 IPR003591 -
Dere05g1851 982 SMART LRR_typ_2 90 114 IPR003591 -
Dere05g1851 982 SMART LRR_typ_2 473 496 IPR003591 -
Dere05g1851 982 SMART serkin_6 647 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1851 982 ProSiteProfiles Leucine-rich repeat profile. 164 186 IPR001611 GO:0005515
Dere05g1851 982 Pfam Protein kinase domain 650 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1851 982 ProSiteProfiles Protein kinase domain profile. 647 917 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1851 982 Gene3D Ribonuclease Inhibitor 259 345 IPR032675 -
Dere05g1851 982 Gene3D Ribonuclease Inhibitor 346 442 IPR032675 -
Dere05g1851 982 Gene3D Ribonuclease Inhibitor 443 568 IPR032675 -
Dere05g1851 982 ProSiteProfiles Leucine-rich repeat profile. 116 139 IPR001611 GO:0005515
Dere05g1851 982 Gene3D Ribonuclease Inhibitor 22 184 IPR032675 -
Dere05g1851 982 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
Dere05g1851 982 ProSitePatterns Serine/Threonine protein kinases active-site signature. 768 780 IPR008271 GO:0004672|GO:0006468
Dere05g1851 982 ProSitePatterns Protein kinases ATP-binding region signature. 653 675 IPR017441 GO:0005524
Dere05g1851 982 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 723 924 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1851 Dere-ChrDere05 28330887 28338267 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1851 92 981 Receptor kinase-like Gene Family AT5G07180 64.871 0.0 1142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Dere05g1851 Pkinase 8.4e-44 CL0016