Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1842 ATGATTGCTTACCTCGAGCACTTCGTTCACGGAACTGACAAAGAATCGAGGCCCGACGACGACGTCATCGGCCTCTCCAAAGCGCTTGACATCCAAGGCACCATCGACTCCCCCCCCACCGGCATAGCCAGTAAAGATTTCGGAGGCCTGCAATCTGTGAAACCCTTGGCCCTTATCAGACCCGCCGCCGCCGACGACATCGCTCGGGTCATCAAAGCGTCGGCCACGTCGCCGAGTCTGACGGTTGCTGCCCGAGGCAACGGCCACTCGATTAATGGCCAGGCTATGGCCGATCAAGGCCTCGTCCTCGACATGCGTAGCATGGAGGAGGATTTTCGCGTGGTGTGGAGACATGGCTCGCCCTACGTCGACGTCCCTGGAGGGGCATTATGGGAAGACGTCCTGAAACGGTGCGTGGGGTTGGGGTTAGCCCCAAGGTCATGGACGGATTATCTGGGCCTAACCGTTGGGGGAACGCTCTCTAATGCTGGGGTCAGCGGTCAAGCTTTCCGTTACGGTCCACAAACATCAAACGTAACTGAATTGGAGGTTGTAACTGGCAAAGGCGAGACGGTAGTGTGCTCCGAAACCGAAAATTCGGACCTTTTCTTCGGGGCACTGGGTGGGCTCGGTCAGTTCGGTATCATCACCCGAGCCAGAATCGTGCTTCAACAAGCACCAGATATGGTGAAATGGATAAGGGTGGTCTACTCTGCATTTGAAGACTTCACTCGGGATGCTGAGTCGCTGGTGACTCGTCAGGAAGGTGACTCTTTCGATTACGTGGAAGGGTTCGTGTTCGTGAACAGCGACGACCCCGCCAACGGGTGGCCCACAGTGCCATTGGACCAGGACCAAGGCTTCGACCCGAATCATATTCCTCCCACCGCTGGCCCCGTCCTCTATTGCCTCGAACTCGCTCTTCACTATCGCAACTCAGACCAACCTTCGGACGTTGATGCGGATGTGGACAGATTGCTTCGACGGCTGCGATTTGTTGATGGTCTCAAGTTCCAGGCGGATGTGGGATACACGGAGTTCTTGCTACGTGTGAAGCGTGCGGAGGAAGACGCTAAAGCTAACGGCATCTGGGATGTCCCTCACCCTTGGCTCAACCTCTTGGTCTCCAGCTCCAACATTCTTGATTTTGATCGTGTGGTCTTTAAGGACATGCTTAGGCACGGAGTTGGTGGCCCCATTTTGGTCTACCCTCTCTTACGAAGCAAGTGGGATTGTCGCACATCGGTGGTGGTGCCGGAGAGCGAGATCTTCTACATTGTGGCACTGCTCCGTTTTAATCCGCCACCCCCAAAAGGGCCAGCTCCGGAATTCTTGGTGGCACAGAACAACGAGATCATTCGGTTTTGCTGCAGCAGAGGCTTTGATTTCAAGCTATACCTTCCTCACTACAAGTCACAGGAGGATTGGAAGCGACACTTTGGGAATCAATGGACCAGATTCGTGGCTAGAAAGACCAGTTTTGATCCTCTGTTTATCCTTGCACCTGGACAGAAAATATTCTCCAGAAACCCCCAGCCTTAG 1542 0.546 MIAYLEHFVHGTDKESRPDDDVIGLSKALDIQGTIDSPPTGIASKDFGGLQSVKPLALIRPAAADDIARVIKASATSPSLTVAARGNGHSINGQAMADQGLVLDMRSMEEDFRVVWRHGSPYVDVPGGALWEDVLKRCVGLGLAPRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELEVVTGKGETVVCSETENSDLFFGALGGLGQFGIITRARIVLQQAPDMVKWIRVVYSAFEDFTRDAESLVTRQEGDSFDYVEGFVFVNSDDPANGWPTVPLDQDQGFDPNHIPPTAGPVLYCLELALHYRNSDQPSDVDADVDRLLRRLRFVDGLKFQADVGYTEFLLRVKRAEEDAKANGIWDVPHPWLNLLVSSSNILDFDRVVFKDMLRHGVGGPILVYPLLRSKWDCRTSVVVPESEIFYIVALLRFNPPPPKGPAPEFLVAQNNEIIRFCCSRGFDFKLYLPHYKSQEDWKRHFGNQWTRFVARKTSFDPLFILAPGQKIFSRNPQP 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1842 513 SUPERFAMILY FAD-binding/transporter-associated domain-like 36 223 IPR036318 GO:0050660
Dere05g1842 513 SUPERFAMILY FAD-linked oxidases, C-terminal domain 227 507 IPR016164 GO:0003824|GO:0050660
Dere05g1842 513 Pfam FAD binding domain 55 195 IPR006094 GO:0050660
Dere05g1842 513 Gene3D - 105 228 IPR016169 -
Dere05g1842 513 Gene3D - 230 466 IPR016170 -
Dere05g1842 513 Gene3D - 43 508 IPR016167 -
Dere05g1842 513 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 227 507 IPR015345 GO:0009690|GO:0019139|GO:0050660
Dere05g1842 513 PANTHER GULONOLACTONE OXIDASE 18 508 - -
Dere05g1842 513 ProSiteProfiles PCMH-type FAD-binding domain profile. 51 226 IPR016166 GO:0071949
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1842 Dere-ChrDere05 28240757 28244634 Transposed