Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1834 ATGTATAGGTACCCAACTTTCGCTACCGCCATCCTCGATAGAATTGACCGTTCCATCGAGGAAGGGGAGAGGAAGAGTGGGGATATGAACTTGTACAGAGAAAAGCCGAAAGAAATGTACAAGTTAGGAGGATTCTCATCCTCTGGCTCGGACTCCATGTGTACCGCACCCCCGAGGCCTAAGCTGAAGTTGAAGAACAAGCCTTCTATGGGAGGCTTTGAAGACGTGAAGGCTGAGAGCAAAACTTATTTGTATGAACAGAAGATGATGTCTCAGTCGACAGTAGAAGAAGCTGTTCGGAAACAGTACCTCCGAAAACAGAGGTTGCCCATCATTGAAGAAGAACATGATGCAGCATATTGTTCAAGCTCAGATCTTTTTGAGCTTGATCTTGATCACTTAATGTCCGTCAGAACAAATTCAAATGAGGTTGAGGAAGAAGAACTTTTTGAGCTTGATCTTGATAACTTAGTGTCCATCAGAACAAATCCAAATGAGGTTGAAGAAGAAGAACTTTTTGAGCTTGATCTTGATCACTTAGTGTCCATCAGAACAAATCCAAATGAGATTGAAGAAGAAGCACTTTTTGACCTAGAACTACCCACGGCTAATGGTCTCATCTTGGAAATTGGAATATCCCAATCTCGGACTCGTATTGATATCACTCCTAATGAGGAAGAACTCATTCTCAGGCTCCATAAGCTTCTTGTTAACAGAAAGCTACCCAGAAGAACTGACAATGAAATCAAGAATTATTGGAACGCAACTCTGGCAAGGAAGCTTAGAACACAATCATGTGCAATGTCTGAACGACATCGTTTGAGCAATTCAACAGCAACAGATCTGTGTGCAGACTTTAAGCTTGAGGGCAGTTTGGCCATAAATGGTCATGGTGATGAGTCCCAACCTGTTGACGAAGATATCGTGAATTGCTGGACCACAAGAAGTGGCTTTGAGGTCGACGATAATGCCAATTTGGATCTTCATTCATTGGCCCTCCTGGAATCTGAGGATTGGTGGTGA 1023 0.4301 MYRYPTFATAILDRIDRSIEEGERKSGDMNLYREKPKEMYKLGGFSSSGSDSMCTAPPRPKLKLKNKPSMGGFEDVKAESKTYLYEQKMMSQSTVEEAVRKQYLRKQRLPIIEEEHDAAYCSSSDLFELDLDHLMSVRTNSNEVEEEELFELDLDNLVSIRTNPNEVEEEELFELDLDHLVSIRTNPNEIEEEALFDLELPTANGLILEIGISQSRTRIDITPNEEELILRLHKLLVNRKLPRRTDNEIKNYWNATLARKLRTQSCAMSERHRLSNSTATDLCADFKLEGSLAINGHGDESQPVDEDIVNCWTTRSGFEVDDNANLDLHSLALLESEDWW 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1834 340 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 218 273 - -
Dere05g1834 340 CDD SANT 222 257 IPR001005 -
Dere05g1834 340 MobiDBLite consensus disorder prediction 49 70 - -
Dere05g1834 340 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 213 261 IPR017930 -
Dere05g1834 340 Gene3D - 222 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1834 Dere-ChrDere05 28115476 28122780 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1834 218 274 MYB Transcription Factor Family AT5G49330 49.206 2.40e-11 62.4