Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1819 ATGAGTTTAAGGGCAGCTGAGGAAGATCCGGCTTCAGAAATTAATATCCCAGCAGAGATAGATTGGCACATGCTTGACAAATCTAAATTCTTCTTCCTAGGCGCCGCTTTGTTTTCCGGTGTATCCACTGCGCTTTATCCTATTGTTGTGTTAAAGACTCGCCAGCAGGTTTGTTCATCCCAGATTTCTTGCTTCAGAATGTCTTTTTCCATCATGCGCTACGAAGGTTTGAGAGGGTTTTATAAAGGTTTTGGTACCTCTTTGACTGGAACAATCCCTGCTAGAGCCCTTTACATGGGTGCGCTAGAAGTCACCAAGAGTAATGTTGGCTCTGTTATTGCTGGCTTGGGGTTTTCAGATACCACTGCTACCGCCATAGCTAATGCTTCTGCAGGAGTGAGTTCTGCTATGGCTGCACAATTGGTTTGGACCCCAATTGATGTTGTGAGCCAAAGACTCATGGTTAGTGGTAGCAAGAACATGCTTCCCAATGTTTATTCTGGGAATTACAGGAATGGTTTTGATGCCTTCAGGAAAATTCTTTGCGCAGATGGACTGCGAGGGTTATATAGAGGATTTGGGATTTCAATATTGACTTATGCTCCATCCAATGCTGTGTGGTGGACTTCTTACTCTCTGGTCCATCGGCTAATCTGGGGTGCTTATGGTTGCTATATGGGTAAGAGGGACGAGAGCAAATTGGCCAAAGGGTATGATTTTAGGCCTGATTCGAAGGCTATGGTTGCAGTCCAAGGGTTAAGTGCAGTTATGGCCAGTGGGGTTTCAGCTATTATTACTATGCCACTTGATACGATCAAGACAAGGTTGCAGGTTCTGGATGCAGAGGAGAATGGACGAAGAAAGCCATTGACTGCTATGCAAACTGTTAGGAATTTGGTGAAGGAAGGTGGCTTCCTTGCTTGTTACAGAGGATTGGGGCCAAGGTGGGCTTCGATGTCTATGTCTGCAACAACCATGATTACTACCTACGAGTTTTTGAAACGAATCTCTACCAAGAGTCAGGAGCAATAA 1032 0.4496 MSLRAAEEDPASEINIPAEIDWHMLDKSKFFFLGAALFSGVSTALYPIVVLKTRQQVCSSQISCFRMSFSIMRYEGLRGFYKGFGTSLTGTIPARALYMGALEVTKSNVGSVIAGLGFSDTTATAIANASAGVSSAMAAQLVWTPIDVVSQRLMVSGSKNMLPNVYSGNYRNGFDAFRKILCADGLRGLYRGFGISILTYAPSNAVWWTSYSLVHRLIWGAYGCYMGKRDESKLAKGYDFRPDSKAMVAVQGLSAVMASGVSAIITMPLDTIKTRLQVLDAEENGRRKPLTAMQTVRNLVKEGGFLACYRGLGPRWASMSMSATTMITTYEFLKRISTKSQEQ 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1819 343 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 12 342 - -
Dere05g1819 343 Pfam Mitochondrial carrier protein 36 107 IPR018108 -
Dere05g1819 343 Pfam Mitochondrial carrier protein 249 339 IPR018108 -
Dere05g1819 343 Pfam Mitochondrial carrier protein 124 219 IPR018108 -
Dere05g1819 343 PRINTS Mitochondrial carrier protein signature 43 57 IPR002067 GO:0055085
Dere05g1819 343 PRINTS Mitochondrial carrier protein signature 190 208 IPR002067 GO:0055085
Dere05g1819 343 PRINTS Mitochondrial carrier protein signature 255 277 IPR002067 GO:0055085
Dere05g1819 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Dere05g1819 343 Gene3D Mitochondrial carrier domain 29 343 IPR023395 -
Dere05g1819 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 246 336 IPR018108 -
Dere05g1819 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 217 IPR018108 -
Dere05g1819 343 SUPERFAMILY Mitochondrial carrier 23 333 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1819 Dere-ChrDere05 27942467 27943498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1819 1 342 Chloroplast and Mitochondria Gene Families AT1G72820 68.116 7.47e-168 469