Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1806 ATGGAATTAGAAGATTTTAGGGAATTAAAAATCATAACATACTTCATCTTCACGCCCCGAAGTCCGTATTTCTTTTGCTTCTATAACTGTCTTCCTCGCTCTGCTTCATTTAACAATAGTAAATCTGCATCTGCATCAACCATTCGTGCAGCTCTTGCTTCAGATCTTATAACCTTATTCTCCAAAGGCAATTTTTCTATAACCATCATCAACACTTACAGCAGTGGACCTGTCAAGAATGGATCGTCATTTAACAATATTTTAGACTCTGATGATAAAGTAAAGTTAGTTGTTTCCGTTGTTGTCGGGGAGTTTGCATGGGGTCCTCTTTCAGAGCAAGAGGCAGGACCCAAAATTTCCCTTCTTCTTCTTCCTCTTTTCCTTTGTGATATTGGTGGACGTGGCGGTGGCAACTGTGGTGAGCAAAACCTAATCATGTCTGCTCACCAGCCATTCGATGGCAGCGCTCTGCCTTTAAACACCACCATGGTGGCCGTTGACAAAGGCAAGAACAGTGTGTATGCCTTCCGATGGGCAATTAATCATCTCGATAACCCTACCATCGTCGCTCTCCACGTTAGGCACAAAAACATTCCACCTAATGGCAAGAATGTCTTCGCCCCCGACGAAAGTGATGTGGAGAATGTTTTCTCTGCATTGCGAGCAATATGTCCTCATAAAGCGGTCCAGATAAAAGAAGCAGTAATTGATGATAGTGATGTTGCCAAAGGAATTTCAGACTTTGCAAACAAGTATTGCATCCACAGTATCGTTCTTGGTGCAACGGCCAGGAACGCTCTGGCAAGGAAATTTATTGGTTATGATTTGCCCACAGCCATAATCAAGTCAGTTCCAGATTATAGTTCTGTGTACGTAATTTCAAAAGGGAAGATAGTCTCAGCTCGATCAGCACTACGTCCTATGTCCAACATAGCTGTCCCACCAAAACAAACGCAGGCACTTCAACTTAATGATGCAGAAAATGGAGTAAGGGCACGGGTAGCTAAAACATGGGAGACGACAGAAGGATCAGAAATAACGTCTTTTGAGAGGAATAATAATGGACCAAGGCGAAAGATTTCTGGCGGTACGTCCATGGAAAACATTGATATATCTTACCGTGGACTGAGGCCATCAGCTAGCCGTGATTCTGGCTCGGACGAAAGTGTTTCGTCAGAGCCACTTAAGTTTGGGTCAATGGATCTAAGTATACAAGATATGGATTCAAGCTTTTCATCTGATGGCTCCAGGACATCATCATCTTCCCAACCGTCAAAAGACTTAGAAGCTGAGATGAAGAGATTGAGGCTTGAACTGAAGCAAACCATGGACATGTACAGCTCAGCTTGCAAAGAAGCAATCTCAGCAAAAAATAAGGCTAATGAGATTAATCAATGGAAATTGGAGGAGGCACGTAAAGTTGAGGAAGCTATATTGTCAGGAGAGGCAGCTCTTGCTCTGGCAGCAAAGGAGAAGGCTATAGCCAAAGCTGCCATGCAACAGGCTGAGGAAGCCAAAAAAATGGCTGAGAAGGAAGCACTAAGAAGGAAACATGCAGAGATGAAGGCCAGGAGAGAGGCAGAAGAGAAGGACCGAGCATTAACTGCTTTGGCGAAAAATGATATTCGATACAGAAAATACACTATAGAGGAGATCGAAAAGGCTACTGAAAAGTTCTCCCAATCCTTTAAGATAGGTGAAGGTGGATATGGACCTGTGTTTAAAGGCCAACTTGATCACACCCCAGTTGCGATCAAAATCTTGAGACCCGATGCTGCTCAGGGCAGGAAGCAGTTCCAACAAGAGGTTGAGGTATTATGCTGCATTAGACATCCTAATATGGTCCTCCTCCTTGGTGCCTGTCCTGAGTACGGGTGCTTGGTGTATGAATTCATGGAAAATGGTAGCTTAGAAGATAGATTATTCCGGAAGAATAACACACCGCCTATTTCATGGAGGTTAAGGTTTAGAATAGCTGCTGAGATTGCAACTGCACTTCTTTTCCTTCACCAAAGCAAGCCAGAACCCCTTGTGCACCGGGACCTAAAACCAGCCAACATTCTCTTGGACCGGAATTATGTGACTAAAATCAGTGACGTGGGCCTGGCACGATTGGTTCCGCCTTCTGTAGCCGATAGCGTCACACAATATCACATGACTTCGGCTGCCGGGACCTTCTGTTACATTGATCCTCAGTATCAGCAAACAGGAATGTTAACAACTAAATCAGATATATATTCATTGGGGATAATGCTACTTCAAATCATCACAGCCAAGCCTCCAATGGGTCTTGCCCACCAAGTCAACAGGGCAATTGAGAAGGGAACATTTTCAGAGATGCTTGATCCTTCGGTGATTGATTGGCCAGTTGAAGAGGCTCTAGCATTTGCCAAATTGGCGGTGAGGTGTGCAGAGCTTAGCAAGAGGGACAGGCCAGATCTTGCAACAGTTGTTGTACCAGAGCTTAACCGGTTAAGAGATCTTGAATATACATCACACCCTAGTCCAATTGTTATCAGTAACAATCAGAGTCCTAGCCAAGCGGGACGCCCTCCTACGCCTACACGAAATCCATGA 2577 0.4439 MELEDFRELKIITYFIFTPRSPYFFCFYNCLPRSASFNNSKSASASTIRAALASDLITLFSKGNFSITIINTYSSGPVKNGSSFNNILDSDDKVKLVVSVVVGEFAWGPLSEQEAGPKISLLLLPLFLCDIGGRGGGNCGEQNLIMSAHQPFDGSALPLNTTMVAVDKGKNSVYAFRWAINHLDNPTIVALHVRHKNIPPNGKNVFAPDESDVENVFSALRAICPHKAVQIKEAVIDDSDVAKGISDFANKYCIHSIVLGATARNALARKFIGYDLPTAIIKSVPDYSSVYVISKGKIVSARSALRPMSNIAVPPKQTQALQLNDAENGVRARVAKTWETTEGSEITSFERNNNGPRRKISGGTSMENIDISYRGLRPSASRDSGSDESVSSEPLKFGSMDLSIQDMDSSFSSDGSRTSSSSQPSKDLEAEMKRLRLELKQTMDMYSSACKEAISAKNKANEINQWKLEEARKVEEAILSGEAALALAAKEKAIAKAAMQQAEEAKKMAEKEALRRKHAEMKARREAEEKDRALTALAKNDIRYRKYTIEEIEKATEKFSQSFKIGEGGYGPVFKGQLDHTPVAIKILRPDAAQGRKQFQQEVEVLCCIRHPNMVLLLGACPEYGCLVYEFMENGSLEDRLFRKNNTPPISWRLRFRIAAEIATALLFLHQSKPEPLVHRDLKPANILLDRNYVTKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPQYQQTGMLTTKSDIYSLGIMLLQIITAKPPMGLAHQVNRAIEKGTFSEMLDPSVIDWPVEEALAFAKLAVRCAELSKRDRPDLATVVVPELNRLRDLEYTSHPSPIVISNNQSPSQAGRPPTPTRNP 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1806 858 MobiDBLite consensus disorder prediction 834 858 - -
Dere05g1806 858 MobiDBLite consensus disorder prediction 343 428 - -
Dere05g1806 858 ProSitePatterns Serine/Threonine protein kinases active-site signature. 677 689 IPR008271 GO:0004672|GO:0006468
Dere05g1806 858 Gene3D Transferase(Phosphotransferase) domain 1 632 835 - -
Dere05g1806 858 MobiDBLite consensus disorder prediction 382 426 - -
Dere05g1806 858 CDD STK_N 161 296 - -
Dere05g1806 858 ProSiteProfiles Protein kinase domain profile. 559 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1806 858 FunFam U-box domain-containing protein 51 632 832 - -
Dere05g1806 858 Coils Coil 485 531 - -
Dere05g1806 858 MobiDBLite consensus disorder prediction 834 850 - -
Dere05g1806 858 MobiDBLite consensus disorder prediction 343 368 - -
Dere05g1806 858 SUPERFAMILY Protein kinase-like (PK-like) 542 818 IPR011009 -
Dere05g1806 858 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 161 273 - -
Dere05g1806 858 Coils Coil 425 445 - -
Dere05g1806 858 Gene3D HUPs 147 277 IPR014729 -
Dere05g1806 858 PANTHER OS02G0152300 PROTEIN 163 833 - -
Dere05g1806 858 Gene3D Phosphorylase Kinase; domain 1 537 631 - -
Dere05g1806 858 Pfam Protein kinase domain 561 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1806 858 SMART serkin_6 559 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1806 858 Pfam Universal stress protein family 163 273 IPR006016 -
Dere05g1806 858 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 532 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1806 Dere-ChrDere05 27839213 27843699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1806 233 834 Receptor kinase-like Gene Family AT5G12000 62.908 0.0 751
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Dere05g1806 PK_Tyr_Ser-Thr 1.8e-38 CL0016