Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1793 ATGATGTTGACGGAAGGAAGGGCTCGGAAAAGCGAAGGAGTCACGGAGGCTGAGAATCGAAGGATGAACGCAGAGCACGACGACGCAGAAAGAAGCTGTAAATTAAGAGAAGAATCATTGAGGCCGTACTCTTCGCTGGCGAGCTTTCCCCGTGATCTCTTGGCTGGAGCGCTCATGGGTGCGGCGGTGCACACGATTGTGGCCCCAATTGAGAGGGCGAAGCTTTTGTTGCAGACCCAAGAAAGCAATAAGGCAATTGTTGCCGTTGGGCGTCGGAAATTCGAGGGCATGTTCGATTGTATACTTCGTACTGTGAGGGAGGAAGGCATTCTTTCCTTATGGAGAGGCAATGGCAGCAGTGTTCTTCGCTATTGTCCACCGGTCGCGCTCAATTTCTCCCTCAAGGGATTAACTTGGGCTGCTCTTATAGAGTTAAAGGGTGAGAAAAAAGAAATTGAAATTGAAAAGTGTGAACACGAAGCAATTACAGATGTTACAATGGCAGCATTTTATCACCTAAACAGCATGCCTCGTCCAAGGAAGAACAAAGTGCGCCAATTTCGAGGTATCTACCATTTCCTGGCAACCATATACAGAAAAGATGGGATTGTGGGGATTTACTGTGGCCTTTCTGCGTCTCTGCAAGGGATGGTTGTACACCGAGGCCTTTACTTCGGAGGCTTTGATACGATGAAAGAGATACTGTGTGAATTATCAAAACCTGAGTTGGCATTGTGGAAGCGTTGGGTGGTATCTCAGGCGGTGACAACCTCTGCTGGGTTGATATCGTATCCATTAGATACAGTTCGAAGGAGGATGATGATGCAGTCTGGCATGGAAAAGGCCGTGTACAGTTGCACCCTGGACTGTTGGAGGAAGATGTATAGGACAGAGGGGTTGCCTTCATTTTACCGTGGGGCAGTGTCCAACATGTTTAGGAGCACCGGGGCAGCAGCTATCTTAGTGTTGTATGTCGAGGTCAAGAAATTTCTTAATATATCTTTTGGTCACTGA 1014 0.4783 MMLTEGRARKSEGVTEAENRRMNAEHDDAERSCKLREESLRPYSSLASFPRDLLAGALMGAAVHTIVAPIERAKLLLQTQESNKAIVAVGRRKFEGMFDCILRTVREEGILSLWRGNGSSVLRYCPPVALNFSLKGLTWAALIELKGEKKEIEIEKCEHEAITDVTMAAFYHLNSMPRPRKNKVRQFRGIYHFLATIYRKDGIVGIYCGLSASLQGMVVHRGLYFGGFDTMKEILCELSKPELALWKRWVVSQAVTTSAGLISYPLDTVRRRMMMQSGMEKAVYSCTLDCWRKMYRTEGLPSFYRGAVSNMFRSTGAAAILVLYVEVKKFLNISFGH 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1793 337 PRINTS Adenine nucleotide translocator signature 49 61 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Dere05g1793 337 PRINTS Adenine nucleotide translocator signature 248 264 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Dere05g1793 337 PRINTS Adenine nucleotide translocator signature 94 115 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Dere05g1793 337 ProSiteProfiles Solute carrier (Solcar) repeat profile. 47 141 IPR018108 -
Dere05g1793 337 MobiDBLite consensus disorder prediction 1 32 - -
Dere05g1793 337 ProSiteProfiles Solute carrier (Solcar) repeat profile. 247 330 IPR018108 -
Dere05g1793 337 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 44 331 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Dere05g1793 337 SUPERFAMILY Mitochondrial carrier 47 326 IPR023395 -
Dere05g1793 337 Pfam Mitochondrial carrier protein 180 236 IPR018108 -
Dere05g1793 337 Pfam Mitochondrial carrier protein 48 136 IPR018108 -
Dere05g1793 337 Pfam Mitochondrial carrier protein 244 332 IPR018108 -
Dere05g1793 337 Gene3D Mitochondrial carrier domain 51 333 IPR023395 -
Dere05g1793 337 PRINTS Mitochondrial carrier protein signature 52 65 IPR002067 GO:0055085
Dere05g1793 337 PRINTS Mitochondrial carrier protein signature 207 225 IPR002067 GO:0055085
Dere05g1793 337 PRINTS Mitochondrial carrier protein signature 252 274 IPR002067 GO:0055085
Dere05g1793 337 PRINTS Mitochondrial carrier protein signature 65 79 IPR002067 GO:0055085
Dere05g1793 337 PRINTS Mitochondrial carrier protein signature 116 136 IPR002067 GO:0055085
Dere05g1793 337 ProSiteProfiles Solute carrier (Solcar) repeat profile. 155 234 IPR018108 -
Dere05g1793 337 MobiDBLite consensus disorder prediction 9 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1793 Dere-ChrDere05 27702418 27707475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1793 49 328 Antiporters AT4G28390 35.714 1.00e-50 171