Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1779 ATGTCCAAAATGAAGCATCTACTAAGAAAGCTTCACATCGGTGGTGGTATCAATGAACCCCACAGATTGCCTGATGCCCGCCCGGTGATCACTCCCAGTCCCACCCCTAATCTCTCTTCATCTTCTTCGACCGTGGCGTCGAATACAATGGGGACAATCCGGCCAAATGAATCGGTTGCTGATCGGACGGATATTGATGGAAGTGGTGCTCTTTGTGGCGACAAGGCAGCTGATTTTAATCTTTTGGAGGAAGAGTTTCAGTTGCAGTTGGCTTTAGCGATTAGCGCTTCCGATCCTGACGTGCGCAAGGACCCTGAGTCTGCTCAGATCGACGCCGCGAAGCAGATGAGCCTCGGCTGCACGGCTTCGGTCTCCGACAAGGAAGCGCTTGTCCAATTTCAATCGCTTCGTTATTGGAACTATAATGTCATTGATTATGAAGAGAAAGTGATGGATGGATTTTATGATGTATGTGGTTTCACCTCAAATTTAACTGAACCAGGAAAGATGCCATCGTTGGCGGATTTGCAAACTACTTCCATCTCAGAAAATCTTGGTTGTGAAGTGATTTTGGTGAACCGTGTAGTTGATATTGAGCTGCAACAGCTTGAGAAAAAAGCCTGTGCTTTATCTAAGGACTGTTGCTCTACCGAACAAGGACTAGTTCTAAGTGGCTTGCTTCAGAACCTTGCTGATATTGTTGTTAAAAGAATGGGTGGGCCTGTTGGTGACCCTGATGAAATGCTGAAAAAGTGGGCGGTGAGGAGTCATGAGTTACGTAATTCTTTAAGGACAATTGTTATTCCCCTTGGTTGTCTTGATGTTGGACTTTCTCGTCATCGAGCCCTACTATTTAAGGTGATGGCAGATAGGATTAATGTTCCCTGCATGCTGGTCAAAGGGAGCTATTACACTGGAACTGATGATGGAGCTGTAAATCTGATTAAAGCTGATGATGGAAGTGAATACATTATTGATTTGATGGGTGCTCCTGGTGCTCTTATTCCTGCTGAAGTACCCAGTAGTCAGCTCCAAAACTACAGTTTTGCTGTAAGGGGTTGTGCGGAGATTGTGGAACCACCTAACAATGCACATCTGATGCTTAATGATGGAACTAGAATGCTGGCAGTTTCATCTGATCTTGATAGAACTCTAACAGCAGGCAGGGCTCAGTCAGAAGAATTATTAAATTTGGGCAGTCAAACAAAACTGGATGAAAGGAACCAAGGCGGGATATGTCAAGTGGAGAGATTTGAGCATGATTTGGGGAATCTTCTTCAGTCTTTGCATAAATCATGTGAAAGCACATCACATACAGAAGCATCATCTGCAGAAAAGAAGCAAGTGAAAAATGTATCCAAGTATGTCCTTAGTGCAGCAAAGAACCCAGAATTTGCTCAAAAGCTACATGCTGTTCTATTAGAGAGTGGTGCAATACCCCCTCCTGATCTATTTTCCTATATTCATCCACAAGATATAGGTGGAGATAAATTTAGTGAACAAATTCGCCAACTTAATAGAAAAATTCTGGATGATACTGTTCAATCTCATCCAGAAAACTTGTTATTAAGCTTTGAGAAGTCTCTCATATCTTCTCAGGGGGTGTGCTCTGTGAATGATTTAAGATTCTGTCAATCTGCTAATTGGTTAGCTGAACAGAAAGAAGAAGCAGAGCAAAATGATGCCGTGGTTACAGATAGGGTTCCTGCCAATCTGCAAAAGATGCATGAAGAACAAGTTCTTGATTCTTCCTTGACCAAGGCAATTGTTTCTTGCAAAAGACAAATTGGGGTTGACTCCATCTCTGATGATGCAAATGGTCTTAATAATAAAGTTGGAGTGGCTTTTAATTCCAATGAATTTGGGAAAGACTCTGCCATTCAATTTAATGAAGGGGCTTGTAGAGATGGCATCTTAAATGATGTTAAAAGTGAGAAAGTTAAGTCAGTACTGGGGGAGGGCACAGAATGGGAAATTAAATGGGAGGATCTTCATATTGGTGAGCGTATTGGCATAGGTTCTTATGGTGAGGTTTACCATGCTGACTTGAAAGGCACTGAAGTTGCTGTGAAGAAGTTTCTGAACCAAGACTTTTCTGGGGATGCATTGGTTCAGTTCAGATCTGAAGTTGAGATCATGTTGAGGCTTCGGCATCCTAATGTCGTGCTTTTCATGGGAGCTATTACTCGTACCCCGCATTTTTCTATATTGACAGAGTTTCTTCCAAGAGGGAGTTTATATAGGCTTTTGCATCGACCCAATTTTCAACTTGATGAAAAGAGGAGGTTGCGCATGGCTCTTGATGTGGCTAAGGGAATGAATTACTTGCACACGAGCCATCCTCCCATTGTCCATCGAGATTTAAAGTCTCCAAATCTTCTTGTTGACAAACATTGGGTGGTTAAGGTTTGTGATTTTGGTTTGTCACGTATGAAGCATCATACTTTTCTGTCTTCAAAATCTTCTGCTGGAACGCCCGAGTGGATGGCACCAGAAGTATTAAGAAATGAACCAGCCAATGAGAAGTGTGATGTTTATAGTTTTGGTGTGATTTTGTGGGAGTTAGCTACTGCAAAAATCCCATGGAAAGGGTTGAACCCAATGCAGGTTGTTGGTGCTGTTGGATTCCAAAATAGACGGCTTGAAATTCCAGAAGATGTTGATCCTGTGGTAGCACAAATAATACGCGACTGTTGGCAAATGGAGCCGCACCTGCGGCCATCATTTTCACAGCTCATGTCTCGTCTCCGCCGACTTCAACATCTGGTTGTTAAAAGTATGAGCTCAACGCAATAA 2796 0.4278 MSKMKHLLRKLHIGGGINEPHRLPDARPVITPSPTPNLSSSSSTVASNTMGTIRPNESVADRTDIDGSGALCGDKAADFNLLEEEFQLQLALAISASDPDVRKDPESAQIDAAKQMSLGCTASVSDKEALVQFQSLRYWNYNVIDYEEKVMDGFYDVCGFTSNLTEPGKMPSLADLQTTSISENLGCEVILVNRVVDIELQQLEKKACALSKDCCSTEQGLVLSGLLQNLADIVVKRMGGPVGDPDEMLKKWAVRSHELRNSLRTIVIPLGCLDVGLSRHRALLFKVMADRINVPCMLVKGSYYTGTDDGAVNLIKADDGSEYIIDLMGAPGALIPAEVPSSQLQNYSFAVRGCAEIVEPPNNAHLMLNDGTRMLAVSSDLDRTLTAGRAQSEELLNLGSQTKLDERNQGGICQVERFEHDLGNLLQSLHKSCESTSHTEASSAEKKQVKNVSKYVLSAAKNPEFAQKLHAVLLESGAIPPPDLFSYIHPQDIGGDKFSEQIRQLNRKILDDTVQSHPENLLLSFEKSLISSQGVCSVNDLRFCQSANWLAEQKEEAEQNDAVVTDRVPANLQKMHEEQVLDSSLTKAIVSCKRQIGVDSISDDANGLNNKVGVAFNSNEFGKDSAIQFNEGACRDGILNDVKSEKVKSVLGEGTEWEIKWEDLHIGERIGIGSYGEVYHADLKGTEVAVKKFLNQDFSGDALVQFRSEVEIMLRLRHPNVVLFMGAITRTPHFSILTEFLPRGSLYRLLHRPNFQLDEKRRLRMALDVAKGMNYLHTSHPPIVHRDLKSPNLLVDKHWVVKVCDFGLSRMKHHTFLSSKSSAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELATAKIPWKGLNPMQVVGAVGFQNRRLEIPEDVDPVVAQIIRDCWQMEPHLRPSFSQLMSRLRRLQHLVVKSMSSTQ 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1779 931 Gene3D Phosphorylase Kinase; domain 1 657 741 - -
Dere05g1779 931 Gene3D Transferase(Phosphotransferase) domain 1 743 928 - -
Dere05g1779 931 SUPERFAMILY Protein kinase-like (PK-like) 654 915 IPR011009 -
Dere05g1779 931 Pfam Ethylene-responsive protein kinase Le-CTR1 132 335 - -
Dere05g1779 931 PRINTS Tyrosine kinase catalytic domain signature 843 865 IPR001245 GO:0004672|GO:0006468
Dere05g1779 931 PRINTS Tyrosine kinase catalytic domain signature 824 834 IPR001245 GO:0004672|GO:0006468
Dere05g1779 931 PRINTS Tyrosine kinase catalytic domain signature 777 795 IPR001245 GO:0004672|GO:0006468
Dere05g1779 931 PRINTS Tyrosine kinase catalytic domain signature 738 751 IPR001245 GO:0004672|GO:0006468
Dere05g1779 931 PRINTS Tyrosine kinase catalytic domain signature 887 909 IPR001245 GO:0004672|GO:0006468
Dere05g1779 931 FunFam Serine/threonine-protein kinase CTR1 743 926 - -
Dere05g1779 931 CDD STKc_MAP3K-like 670 916 - -
Dere05g1779 931 FunFam Serine/threonine-protein kinase isoform 1 655 742 - -
Dere05g1779 931 SMART serkin_6 664 923 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1779 931 ProSitePatterns Protein kinases ATP-binding region signature. 670 692 IPR017441 GO:0005524
Dere05g1779 931 Pfam Protein tyrosine and serine/threonine kinase 664 916 IPR001245 GO:0004672|GO:0006468
Dere05g1779 931 MobiDBLite consensus disorder prediction 32 56 - -
Dere05g1779 931 ProSitePatterns Serine/Threonine protein kinases active-site signature. 783 795 IPR008271 GO:0004672|GO:0006468
Dere05g1779 931 MobiDBLite consensus disorder prediction 15 63 - -
Dere05g1779 931 ProSiteProfiles Protein kinase domain profile. 664 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1779 931 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 147 925 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1779 Dere-ChrDere05 27579818 27588852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1779 1 930 MAP Kinase Kinase Kinase AT5G11850 55.895 0.0 986
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Dere05g1779 PK_Tyr_Ser-Thr 3.4e-65 CL0016