Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1773 ATGGGCAGGAAATGCTCGTACTGTGGAAACTTGGGTCACAATTCGAGAACTTGTATTAGTCATCAGAGAGGGGGTTTTGTTGGTGGTGGCCTCAAGATCTTCGGTGTGCAACTTGACCCTTCTCCTTCATCTTCTTCTTCTTCTTCACCTACTAATAACTTTGGCATGAAGAGAAGTTTCAGCTTGGACTGCTTGTTGCCATCTCCCCACACCTCCTTATCTGCTCCCTCCTCCTCCTCCTCGCCTTCTCTGCTTGAACCAAATGACATTACAGATCATAAAATGTCTGATACTTTCCTACCCAGTGGCCTCATAGCAAACACCCAAGAAAGGAAGAAAGGAGTGCCATGGACGGAGGAGGAGCACCAGACATTCCTGATAGGGCTGAAGAAGCTTGGGAAGGGGGACTGGAGAGGCATCTCTAAGAATTTTGTTACAACAAGAACACCAACCCAAGTGGCCAGCCATGTGGAAGGAGAAAACACCTCAATTGAACTAGCTATCAATTCTTGGTTTCCTAAGCCAATCGAAGCTGTTGGTCCTTTTGGGTTCCCATCTGAGGCTCCGAAAGATGTCAGATTCAACAGCCACTCCAATAGTAAAAGGATTTGTCTGCCTCGGTGGCTTTCAACTCATTATTCAGCGCTGAATTGGTCTGCCTCTTCAGCGAAGTACACTCTTCAAAGCTTAGAACCTGATTTAGAGCTCAAACTTGCGGCTCCTCGGCTTCTATGA 735 0.4694 MGRKCSYCGNLGHNSRTCISHQRGGFVGGGLKIFGVQLDPSPSSSSSSSPTNNFGMKRSFSLDCLLPSPHTSLSAPSSSSSPSLLEPNDITDHKMSDTFLPSGLIANTQERKKGVPWTEEEHQTFLIGLKKLGKGDWRGISKNFVTTRTPTQVASHVEGENTSIELAINSWFPKPIEAVGPFGFPSEAPKDVRFNSHSNSKRICLPRWLSTHYSALNWSASSAKYTLQSLEPDLELKLAAPRLL 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1773 244 ProSiteProfiles Myb-like domain profile. 109 153 IPR001005 -
Dere05g1773 244 MobiDBLite consensus disorder prediction 71 92 - -
Dere05g1773 244 MobiDBLite consensus disorder prediction 71 87 - -
Dere05g1773 244 SUPERFAMILY Homeodomain-like 110 158 IPR009057 -
Dere05g1773 244 Gene3D - 115 160 - -
Dere05g1773 244 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 109 156 IPR017930 -
Dere05g1773 244 PANTHER TRANSCRIPTION FACTOR KUA1 3 156 - -
Dere05g1773 244 Pfam Myb-like DNA-binding domain 116 156 IPR001005 -
Dere05g1773 244 SMART sant 113 163 IPR001005 -
Dere05g1773 244 CDD SANT 116 156 IPR001005 -
Dere05g1773 244 FunFam transcription factor MYB1R1 115 159 - -
Dere05g1773 244 NCBIfam myb-like DNA-binding domain, SHAQKYF class 112 157 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1773 Dere-ChrDere05 27523817 27524852 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere05g1773 Myb_DNA-binding 1.7e-09 CL0123