Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1723 ATGTTAATGGAATCGGCGTCTGAAGATCAAGAGGAGAGAGAAGGAATAGTCAAAAGAAATAGGCCTTCAGCCATGTTCATCCACGACGACGTCGTCCAAGGGGTTCAGTTCCCATCATGCCCACTTCTTGAAACTATGCTTACGCCAAGTGACATACAGGAGTTGTTGTCCCTCATTCAACCAGGAGATCCGGCCAGTCCAAGCTCCGGTTCGCAAGGATCAAGCCGGGCGGTTTACTCGGTGGACGAGAGAAAGCGCAGGCGCATGCAATCGAACCGGGAGTCAGCCCGGCGGTCCCGCTGGAGAAAGAAGAGGCATGTAGAGAACCTCACGAACCAAGTGAACCGCTTAAAACTTGAAAACCGAGAACTCAAAAACCGGCTAGGCTTCACCCTTCATCAGCATCTCCTAGTTTCCCTAGAGAATGCCCGACTGAGATCCGAATCCGTAACCCTTCTGACCCGGTTCTCGGATCTATATCGGGTTTCAGGCACCATGCTGAGCCCTTAA 510 0.5196 MLMESASEDQEEREGIVKRNRPSAMFIHDDVVQGVQFPSCPLLETMLTPSDIQELLSLIQPGDPASPSSGSQGSSRAVYSVDERKRRRMQSNRESARRSRWRKKRHVENLTNQVNRLKLENRELKNRLGFTLHQHLLVSLENARLRSESVTLLTRFSDLYRVSGTMLSP 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1723 169 MobiDBLite consensus disorder prediction 1 22 - -
Dere05g1723 169 MobiDBLite consensus disorder prediction 62 78 - -
Dere05g1723 169 CDD bZIP_plant_GBF1 85 135 IPR045314 GO:0003700|GO:0006355
Dere05g1723 169 MobiDBLite consensus disorder prediction 79 96 - -
Dere05g1723 169 Gene3D - 82 134 - -
Dere05g1723 169 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 82 128 IPR004827 GO:0003700|GO:0006355
Dere05g1723 169 Coils Coil 107 127 - -
Dere05g1723 169 PANTHER BZIP TRANSCRIPTION FACTOR 44 54 163 - -
Dere05g1723 169 FunFam BZIP transcription factor 82 133 - -
Dere05g1723 169 SMART brlzneu 80 144 IPR004827 GO:0003700|GO:0006355
Dere05g1723 169 Pfam bZIP transcription factor 84 128 IPR004827 GO:0003700|GO:0006355
Dere05g1723 169 SUPERFAMILY Leucine zipper domain 84 135 IPR046347 GO:0003700|GO:0006355
Dere05g1723 169 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 87 102 IPR004827 GO:0003700|GO:0006355
Dere05g1723 169 MobiDBLite consensus disorder prediction 59 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1723 Dere-ChrDere05 26933844 26935805 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1723 81 159 bZIP Transcription Factor Family AT4G37730 58.228 1.06e-20 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere05g1723 bZIP_1 1.4e-10 CL0018