Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1699 ATGGATGACTTTGCGTCCAGCCTTCTGTGCCAAGAAAACGAAGGAGAGGTGGTAGATGAAGATTCATGCATTCAGTGGGAGGAGTATAGGGTTTCAGAGGATGAGTATGTAGACATTTTGATTGAGAGAGAGATCGGCTTTGGGTTCAGAAGGGATGAATCTTTGGTGTTGGGTGATTGGGTCAAAACTGCTCGCTTAGATGCTATCAAATGGATTCTCAAAACAAGAGCAACATTCGGCTTTCGCTTTCAAACAGCTTATTTGTCTGTCACATACTTCGATCGATTCCTTTCTAGACGGTCCATTGATAGCGAAAAGTATTGGGCATTTCGATTACTATCAGTTGCATGCCTTTCTCTCGCCGCCAAGATGGAGGAGTGCGATGTTCCAGCGCTATCGGAGTTCCCTTTACAAGATTGTAACTTTGAAAGCAGAGTCATTCAGAGAATGGAACTTTTGGTGCTCTCCACACTGGAATGGAATATGGGCTTTATTACTCCCTTTGCTTTTTTACCTTATTTCATCACAAAGTTCTGCAACCAACCCCCACCAACTCGTATCTGGTCAAACACTATGCAACTCATCTTCACATTAATGAAAGAGGTCAATTTGATGGACCATAGGCCATCTGTGATAGCAGGTGCGGCTACTTTGGCAGCAATGGATCCGCATTTGACGAGAAAAGCCATAGAATTGAAGATGAGTTTGGCTTCTCGATGTAGGAGTCTTGAACTTGAGAACATATTTGCGTGCTATGATCTAATCCGTAGATTATACGTGGAGAACACTAAAACAGACAAGTTTATAGATTCCTCGACTCCTTCACCTACCCGATCGATGGCAATCGACCTGCTAGAGAGTTCTTTAGTTACTTCTGCTGCTACGTCCAAGAGAAGAAGACTCACATTCCATTATCACAAAGAAAGTCATAACACACATGATGGGAGTTGA 951 0.4301 MDDFASSLLCQENEGEVVDEDSCIQWEEYRVSEDEYVDILIEREIGFGFRRDESLVLGDWVKTARLDAIKWILKTRATFGFRFQTAYLSVTYFDRFLSRRSIDSEKYWAFRLLSVACLSLAAKMEECDVPALSEFPLQDCNFESRVIQRMELLVLSTLEWNMGFITPFAFLPYFITKFCNQPPPTRIWSNTMQLIFTLMKEVNLMDHRPSVIAGAATLAAMDPHLTRKAIELKMSLASRCRSLELENIFACYDLIRRLYVENTKTDKFIDSSTPSPTRSMAIDLLESSLVTSAATSKRRRLTFHYHKESHNTHDGS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1699 316 SMART Cyclin_C_2 165 288 IPR004367 -
Dere05g1699 316 SMART cyclin_7 70 156 IPR013763 -
Dere05g1699 316 Gene3D - 164 253 - -
Dere05g1699 316 SUPERFAMILY Cyclin-like 33 162 IPR036915 -
Dere05g1699 316 SUPERFAMILY Cyclin-like 147 262 IPR036915 -
Dere05g1699 316 ProSitePatterns Cyclins signature. 65 96 IPR006671 -
Dere05g1699 316 Pfam Cyclin, C-terminal domain 165 264 IPR004367 -
Dere05g1699 316 Gene3D - 62 163 - -
Dere05g1699 316 FunFam Cyclin-D5-1 60 163 - -
Dere05g1699 316 FunFam Cyclin-D5-1 164 252 - -
Dere05g1699 316 CDD CYCLIN_AtCycD-like_rpt1 64 160 - -
Dere05g1699 316 CDD CYCLIN_AtCycD-like_rpt2 165 255 - -
Dere05g1699 316 Pfam Cyclin, N-terminal domain 62 162 IPR006671 -
Dere05g1699 316 PANTHER CYCLINS 34 257 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1699 Dere-ChrDere05 26721348 26722725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1699 63 291 Core Cell Cycle Gene Families AT1G70210 37.288 4.40e-40 141