Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1692 ATGGAATCACTTAGAACCTTTCCTGACGTAGAAAGGGGTTGCTTTCGCGGAATGTTTGCATCAGAGGAGGTTGATTACTCACCACAATATCTTGGCCAAAGCTCACTTCTGCTTGAGGAACATGGTGGAATGATTATTGGAATTGAATCCACACTTTGCTCTGCTCCTGAAGCTGGGGAGAATGAGAGTATGTTTGGTTCTTTAGATGCTATGAACTCAAATTTGCAGTTTATTTCTCAAGACAGCAGCTTCAATAGTAATTGTAGTGCCGATACTTTCTTCATTGCCAATCCGGGTTATACGAACTACTATCACAGTGATCCTGATCAGGCACTAGTAAACGATGCCTGCATGCCCATGAATTTTTGCATGATGGATGAGAAAAACACTGGCTCTTTTGTCCCACCACTTGGGGACGTTTTAATGGAGGAGAATGTTAGCTTTAATGATCGTGGACGGAGAGACAGAGTGGAGAATTCTAATCAAAGTCTAGCTGAGTTCACTGCTTTTCCTGCCAAACAGATGCACCTCAAAAGGAAGTTTGATGTGCCGGAACAGGAGGCTTCAGCAGAAGATAATAAAATAAACATCAGCTCGTCCGAGAATCAGAAGAAGAAACCTCGTGTTTCAAAAGATGTGCAAAACAGTAAGAAAATTGCAGGGCCGAAGAATAACAAGAAGGTTACCACAAATGGCCACGAGGTAGAAGAGACTCATACAGGATTAGATGGACAGAGCTCAAGTAGTTACAGCTTAGAGGACGATAATGCTTCTCAGGAAACTAGTGGAGGAGCCAGCTCAGGGTCTAAATCAACTGTGCCTCAAAACTTAAATCGGAAGACAAGAGCCAGTAGGGGATCAGCAACAGATCCCCAGAGCCTTTATGCAAGGAAAAGAAGAGAGAGAATAAATGAACGACTGAGAATCCTACAGAATCTTGTTCCAAACGGAACAAAGGTTGATATAAGCACAATGCTTGAAGAGGCAGTCCATTACGTGAAATTTTTGCAGCTCCAAATTAAGCTTTTAAGCTCTGATGATCTATGGATGTACGCACCAATTGCTTATAATGGAGTCGACATTGGACTGAATCTCGGCCGCAAGATTTCTCTACCTCTTTGA 1122 0.426 MESLRTFPDVERGCFRGMFASEEVDYSPQYLGQSSLLLEEHGGMIIGIESTLCSAPEAGENESMFGSLDAMNSNLQFISQDSSFNSNCSADTFFIANPGYTNYYHSDPDQALVNDACMPMNFCMMDEKNTGSFVPPLGDVLMEENVSFNDRGRRDRVENSNQSLAEFTAFPAKQMHLKRKFDVPEQEASAEDNKINISSSENQKKKPRVSKDVQNSKKIAGPKNNKKVTTNGHEVEETHTGLDGQSSSSYSLEDDNASQETSGGASSGSKSTVPQNLNRKTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPIAYNGVDIGLNLGRKISLPL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1692 373 MobiDBLite consensus disorder prediction 241 291 - -
Dere05g1692 373 SMART finulus 293 342 IPR011598 GO:0046983
Dere05g1692 373 MobiDBLite consensus disorder prediction 198 213 - -
Dere05g1692 373 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 89 359 - -
Dere05g1692 373 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 287 352 IPR036638 GO:0046983
Dere05g1692 373 Pfam Helix-loop-helix DNA-binding domain 297 337 IPR011598 GO:0046983
Dere05g1692 373 Gene3D - 289 345 IPR036638 GO:0046983
Dere05g1692 373 CDD bHLH_AtIND_like 288 350 - -
Dere05g1692 373 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 287 336 IPR011598 GO:0046983
Dere05g1692 373 MobiDBLite consensus disorder prediction 181 298 - -
Dere05g1692 373 FunFam Basic helix-loop-helix transcription factor 288 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1692 Dere-ChrDere05 26643326 26644880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1692 19 363 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 39.665 1.35e-60 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dere05g1692 HLH 1.8e-08 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1692 05 26643326 26644880 Dere05g1692 05 26643326 26644880 ECH