Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere05g1690 | ATGGCGGTGCTACCACAGCCGGCTGCTGTGGACCAAATCTCGTTCAGACCGCCCCCTCTCTTTAGTTCCAATTACAGCTCACTCATCCAATTCAACTCAAACCAACATCTCACCGATCTTCTCTTCTCTGTCTCTTGCTTCCACATAGCAGCTTTGGTTTTTGTTTTGAGGTCAGGTCGGATCAGATCAGATCACATGGCTCTGGAAGCTCTCAAATCACCCACCACCGCTCCCACATCCTTCCCTTTCGAATTGGACTCCAACCTTCACTCCTTGGAGCCATGGACCAAGCGCAAGCGTTCCAAGCGCACCCGTTTTGACCAAGTTTCTTGCACCGAGGAAGAGTATCTAGCTCTCTGCCTTATCATGCTGGCTCGCGGCGGCTCCGGTGTCTCCGCTACCAATCCCACCGCCTTTGACCGCCATAGCTCCCCTCAGGGTACTCCTCCTCCTGCTGCTGTATCCGAGTCAGCGCCGCTTACCGCACCAGATCCAACCACGGCTCCCAAGCTCAGTTACAAGTGCTCGGTTTGCGACAAAGCCTTCTCCTCTTACCAAGCTCTTGGAGGACACAAGGCCAGTCACCGGAAAATCGCAGCAGGAGTTGGCGCCGGGGAAGATCAGTCCACCTCCTCGGCTGTCACAAGTACTTCTGCAAACACCACCATCACTGCATCCAACGCTGGGGGTAAAGCCCATGAGTGTTCAATCTGCCACAAGTCCTTCCCCACCGGGCAGGCCTTGGGGGGACACAAACGCTGCCACTACGACGGCGGTGCTGGGGCCGGTGGCGGCGGAAACAGTGCTATCACCGCCTCGGAAGGGGTTGGGTCCACCCATACCGCCAGCCACAGCCACCGGGACTTCGACTTGAACCTTCCCGCTTTGCCCGATTTTTCAGCCAAGTTCTTCATGTCCGGGGACGACGAGGTGGAGAGCCCTTTGCCAGTGAAAAAGCCTCGCCTTCTGCTAGCTCCCAAAATCGAAATCCCTCAAGACCACTGA | 1005 | 0.5642 | MAVLPQPAAVDQISFRPPPLFSSNYSSLIQFNSNQHLTDLLFSVSCFHIAALVFVLRSGRIRSDHMALEALKSPTTAPTSFPFELDSNLHSLEPWTKRKRSKRTRFDQVSCTEEEYLALCLIMLARGGSGVSATNPTAFDRHSSPQGTPPPAAVSESAPLTAPDPTTAPKLSYKCSVCDKAFSSYQALGGHKASHRKIAAGVGAGEDQSTSSAVTSTSANTTITASNAGGKAHECSICHKSFPTGQALGGHKRCHYDGGAGAGGGGNSAITASEGVGSTHTASHSHRDFDLNLPALPDFSAKFFMSGDDEVESPLPVKKPRLLLAPKIEIPQDH | 334 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere05g1690 | 334 | Gene3D | Classic Zinc Finger | 171 | 255 | - | - | |
Dere05g1690 | 334 | SUPERFAMILY | beta-beta-alpha zinc fingers | 173 | 255 | IPR036236 | - | |
Dere05g1690 | 334 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 235 | 255 | IPR013087 | - | |
Dere05g1690 | 334 | PANTHER | C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED | 100 | 297 | IPR044653 | GO:0003700 | |
Dere05g1690 | 334 | MobiDBLite | consensus disorder prediction | 134 | 165 | - | - | |
Dere05g1690 | 334 | SMART | c2h2final6 | 233 | 255 | IPR013087 | - | |
Dere05g1690 | 334 | SMART | c2h2final6 | 173 | 195 | IPR013087 | - | |
Dere05g1690 | 334 | Pfam | C2H2-type zinc finger | 173 | 197 | - | - | |
Dere05g1690 | 334 | Pfam | C2H2-type zinc finger | 232 | 257 | - | - | |
Dere05g1690 | 334 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 173 | 195 | IPR013087 | - | |
Dere05g1690 | 334 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 175 | 195 | IPR013087 | - | |
Dere05g1690 | 334 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 233 | 255 | IPR013087 | - | |
Dere05g1690 | 334 | MobiDBLite | consensus disorder prediction | 134 | 151 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere05g1690 | Dere-ChrDere05 | 26618384 | 26619943 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere05g1690 | 66 | 330 | C2H2 Transcription Factor Family | AT1G27730 | 49.630 | 9.68e-68 | 210 |