Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1676 ATGGAGACTCGCGCAGCAAAGAGGAGAGCCGAAGCCGCCAGCTTAGCCCAGAATCAGTCTCCCCGAAAGAAGCGTGTGGTGTTGGGGGAACTTCGCAATATATCGAATGCGATCCTTCCCTTAACTTTGAACCAGAAATGTCGAAAGACTACCAAGGTGCAGAAGGCAGCGGCGTCAAAGAAGAACGTTTCATCGGATGATGCGAAGGTCAAGGAGAAGAAGGCAGTGGAAGCTGATTCAAAGCTAGACACGGATGTGAAGTTAGCCGATCCGCAAAAGAACGAGCCTTTTGTCTCTGAAATCTATCAGTACCTTCGCAAAATGGAGATGGAACCGAAGAGAAGACCAATGCCTGACTACCTCGAGAAAGTTCAGAAAGACATAACTGCCAATGCGAGAGGAATATTGATCGATTGGTTAGTGGAGGTTGCCGAGGAGTATAAGCTTCTCTCAGACACTCTTCATCTCTCGGTTTCTTACATTGATAGGTTTCTCTCTGATAATCCTGTCAGTAGGCAGACGCTTCAATTGCTGGGCGTTTCATCTATGCTCATTGCATCGAAGTATGAAGAAATCAGCCCTCCTAATGTGGAAGATTTCTGCTACATTACTGATAACACATACACCCAGGCAGAGGTTCTACAGATGGAAGCTGATGTACTTAAGTCACTAAATTTTGAAGTGGGATATCCTACTGTAAAGACGTTTACTAAAAAATTGCAGATTGAGTTTCTGGGTTACTATCTTGGTGAACTAAGTTTGTTAGATTATAATTTTGTAAAGTTCTTGCCTTCCATGGTGGCTGCATCAGTCATTTTTCTTGCCAGATTTATCATCTGGCCTAAAGTCCATCCCTGGACTACAGCCTTGCAAAAATGTTCTGGATACAAACCTCATGAGTTAAAACAATGCGTGCTTATCTTACACGACTTGTATTTGGCGAGAAAAGCAGCCTCCTTGCAAGCTGTAAGGGAGAAATACAAGCAGCACAAGTTCAAAACTGTGGCAGTCCTGCCTTCCCCTCCGGAGATACCAGCTTCTTACTTCGAGGAATAG 1056 0.4441 METRAAKRRAEAASLAQNQSPRKKRVVLGELRNISNAILPLTLNQKCRKTTKVQKAAASKKNVSSDDAKVKEKKAVEADSKLDTDVKLADPQKNEPFVSEIYQYLRKMEMEPKRRPMPDYLEKVQKDITANARGILIDWLVEVAEEYKLLSDTLHLSVSYIDRFLSDNPVSRQTLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTQAEVLQMEADVLKSLNFEVGYPTVKTFTKKLQIEFLGYYLGELSLLDYNFVKFLPSMVAASVIFLARFIIWPKVHPWTTALQKCSGYKPHELKQCVLILHDLYLARKAASLQAVREKYKQHKFKTVAVLPSPPEIPASYFEE 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1676 351 Pfam Cyclin, C-terminal domain 240 340 IPR004367 -
Dere05g1676 351 ProSitePatterns Cyclins signature. 133 164 IPR006671 -
Dere05g1676 351 Gene3D - 100 337 - -
Dere05g1676 351 SMART cyclin_7 231 310 IPR013763 -
Dere05g1676 351 SMART cyclin_7 138 222 IPR013763 -
Dere05g1676 351 Pfam Cyclin, N-terminal domain 100 228 IPR006671 -
Dere05g1676 351 Gene3D - 116 229 - -
Dere05g1676 351 FunFam Cyclin A1 213 337 - -
Dere05g1676 351 SUPERFAMILY Cyclin-like 232 343 IPR036915 -
Dere05g1676 351 FunFam Mitotic cyclin 6 116 212 - -
Dere05g1676 351 PANTHER CYCLINS 74 329 IPR039361 -
Dere05g1676 351 PIRSF Cyclin_A_B_D_E 2 348 IPR046965 GO:0016538|GO:0044772
Dere05g1676 351 SUPERFAMILY Cyclin-like 90 228 IPR036915 -
Dere05g1676 351 MobiDBLite consensus disorder prediction 1 23 - -
Dere05g1676 351 SMART Cyclin_C_2 231 341 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1676 Dere-ChrDere05 26473231 26475089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1676 3 351 Core Cell Cycle Gene Families AT5G43080 55.307 4.26e-134 384