Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1666 ATGGTGGGGTTGGCGAGTATGTGGGTTTTATTATTCATTCTATCTTCAGTTTTAATCTTTCAATCATCGTCTTCGACAATCGGAACTCTCAACAAGGGCGGGTCCCTTTTGGTACAGAACCCACAAGATGTTCTGGTTTCACCCAATGGCAAGTTCACCGCCGGCTTTCAAGCTGTCGGTGATAATGCCTATTGCTTTGCCGTGTGGTTCACCCACCACCCCACCGTCGTTTGGATGGCCAATCGTGATAAACCGGTCAACGGAAGGCGCTCTAAACTTTCTCTTCTTAAATCTGGTAATCTTCTCTTGACGGATGCTGACGAGTTCACGTGGGCCTCCGACACTTCCTCAGCATCCTCCGTTGAGCTACTTCTCTACGACACTGGTAATCTTGTTCTACGTGAAACGGAGGGTGTCGTCTTGTGGCAGAGCTTTGATTTCCCTACGGACACTCTGCTTCCTCAACAGTTATTCACTAGATATACAAAGCTTATCTCCTCAAGAAGTGAGACGAACTATTCCTCCGGTTTTTATTCTCTGTTTTTCGACAACGACAACGTTCTCCGTCTTCTGTACGATGGTCCTGAAATTTCAAGTATATATTGGCCCGATCCTGGGCTGGTGAGTTGGGAGAATGGAAGGAGCACTTACAATGGAAGTAGGGTTGCGGTACTTGATTCTTTGGGCAATTTCAGTTCATCGGACCAGCTCAGTATTGCAACATCCGATTATGGCAGAGTGGTTCAAAGAAGATTGAAAATTGATTCCGATGGTAATGTTCGAGTTTATAGCCGGGAATCCGAAGGACAGGATTGGTATGTGTCTTGGCTGGCCATATCAACACCCTGCACAATTCACGGAATCTGTGGTGCTAATAGCCTGTGTAGCTATGATCCTGGTTCTGGAAGGAAATGCTCTTGTCTTCCAGGTTTTCGACGGAAGAATGCTAGTGATTGGTCTCTGGGATGTGAACCAAAACGCAATTTCTCCTGCAACCCAAGCGAGTCTTACTTTTTGCGTCTTCCCCATGTTGATTTCTACGGCTATGACCGTGAATATACTCAAAATTCCACCTTCGAGCGATGTTTGAACTTGAGTTTGCAATCCTGTGATTACAAAGGCTTTCAGTATAAATTCAATGAGGACCAAGGCTATTTTAATTGTTTCCCAAAGACGCTGTTGATGAATGGGTATTTTTCACCCGATTTCCAAGGGAATGTCTACTTGAGAGTGCCTAAAAGCACTTCATTCTCCATGGAAAAAGAATTACTTCAGGAATCAAATGCCGTTTGTTCCAACGAAACAATAACGCTTGAAAGAGGGTATGTGAAACCCCATCAAAATGGAAAAGTGAAGCTCGTGGTTTTGTTTGCTTATGGTATAGGGGGGATAGAGATCATTTGTTTCCTTTGGGTGTTGTGCTTCTTGACAAGAAACCGAAGAAGACAGTCCGATGCATACGAGCAGGGCTACCTTCCCGTTGCTTCTGGGTTCAGAAAATATGGTTACTCAGAGCTCGAGAAGGCAACCAGAGGTTTCCGTCAGGAGATTGGAAGAGGTTCAGGTGGGATTGTTTACAAGGGTGAATTGTCAGATCATCGAGTTGCAGCGATCAAGAGACTAAACGAAGCTAATCAAGGACAGGAAGAATTTCTTGCTGAAGTCAGCATCATTGGAATGCTTAATCACATGAACTTGATCAAAATGTGGGGATATTGTGCAGAGGGCAAGCATAGGCTGTTGGTATATGAGTTCATGGAGAATGGTTCTTTGGCTGAAAACCTGGGGTCCAAATCCCATGCTCTGGATGTCAGCAGAAGGTTCAATATTGCGTTAGGCATGGCTAGAGGTCTAGCATATTTGCACGAGGAATGCTTGGAGTGGATTCTGCACTGTGATGTGAAGCCTCAAAACATACTTCTGGATTCTAATTATCAACCAAAAGTAGCAGATTTTGGGCTGTCCAAACTTCTCAAGCGAGATGACTTTGACAATTCGAAGTTCTCCAGAATAAGGGGCACCAGAGGTTACATGGCTCCTGAGTGGGTTTTCAATTTGCCGATTACCTCGAAAGTAGATGTTTACAGCTATGGAATTGTGGTGTTGGAGATGATGACTCGGAGGAATCCCACAGTGGCTGGTGAGCAAGACGTTAGTGGGAGTCATAGAGAAGGGAGGCAACACAGGCTGGTGGAATGGGTGAGGGAGAAGAAGAGCAAAGCATCCTCGAAGGACTCTTGGTTGGAGCAGATTGTGGACCCCGTGATACGGGGAAATTTGGAGTCAGAGGAGATAAAAATTTTGATGGAAGTGGCTTTACAGTGCGTAGAGGAAGATAGAGATGCAAGGCCCACCATGAGACAAGTTATAGAGATGCTACAAAGTCAAGAAAATGATTCGCACTGA 2406 0.451 MVGLASMWVLLFILSSVLIFQSSSSTIGTLNKGGSLLVQNPQDVLVSPNGKFTAGFQAVGDNAYCFAVWFTHHPTVVWMANRDKPVNGRRSKLSLLKSGNLLLTDADEFTWASDTSSASSVELLLYDTGNLVLRETEGVVLWQSFDFPTDTLLPQQLFTRYTKLISSRSETNYSSGFYSLFFDNDNVLRLLYDGPEISSIYWPDPGLVSWENGRSTYNGSRVAVLDSLGNFSSSDQLSIATSDYGRVVQRRLKIDSDGNVRVYSRESEGQDWYVSWLAISTPCTIHGICGANSLCSYDPGSGRKCSCLPGFRRKNASDWSLGCEPKRNFSCNPSESYFLRLPHVDFYGYDREYTQNSTFERCLNLSLQSCDYKGFQYKFNEDQGYFNCFPKTLLMNGYFSPDFQGNVYLRVPKSTSFSMEKELLQESNAVCSNETITLERGYVKPHQNGKVKLVVLFAYGIGGIEIICFLWVLCFLTRNRRRQSDAYEQGYLPVASGFRKYGYSELEKATRGFRQEIGRGSGGIVYKGELSDHRVAAIKRLNEANQGQEEFLAEVSIIGMLNHMNLIKMWGYCAEGKHRLLVYEFMENGSLAENLGSKSHALDVSRRFNIALGMARGLAYLHEECLEWILHCDVKPQNILLDSNYQPKVADFGLSKLLKRDDFDNSKFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMMTRRNPTVAGEQDVSGSHREGRQHRLVEWVREKKSKASSKDSWLEQIVDPVIRGNLESEEIKILMEVALQCVEEDRDARPTMRQVIEMLQSQENDSH 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1666 801 FunFam Serine/threonine-protein kinase 149 276 - -
Dere05g1666 801 Gene3D Phosphorylase Kinase; domain 1 476 585 - -
Dere05g1666 801 PANTHER OS07G0415500 PROTEIN 10 798 - -
Dere05g1666 801 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Dere05g1666 801 Pfam Protein kinase domain 515 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1666 801 CDD EGF 282 315 - -
Dere05g1666 801 SMART blect_4 36 148 IPR001480 -
Dere05g1666 801 FunFam Serine/threonine-protein kinase 586 801 - -
Dere05g1666 801 Gene3D - 25 146 IPR036426 -
Dere05g1666 801 ProSiteProfiles EGF-like domain profile. 279 317 IPR000742 -
Dere05g1666 801 SUPERFAMILY Protein kinase-like (PK-like) 495 794 IPR011009 -
Dere05g1666 801 ProSiteProfiles Protein kinase domain profile. 511 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1666 801 PIRSF SRK 1 801 IPR024171 GO:0004674
Dere05g1666 801 ProSiteProfiles Bulb-type lectin domain profile. 21 146 IPR001480 -
Dere05g1666 801 Pfam D-mannose binding lectin 75 159 IPR001480 -
Dere05g1666 801 SMART serkin_6 511 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1666 801 Pfam S-locus glycoprotein domain 235 314 IPR000858 GO:0048544
Dere05g1666 801 ProSitePatterns Protein kinases ATP-binding region signature. 517 539 IPR017441 GO:0005524
Dere05g1666 801 CDD STKc_IRAK 517 794 - -
Dere05g1666 801 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 204 IPR036426 -
Dere05g1666 801 CDD B_lectin 45 148 IPR001480 -
Dere05g1666 801 Gene3D Transferase(Phosphotransferase) domain 1 586 801 - -
Dere05g1666 801 FunFam S-receptor-like serine/threonine-protein kinase 480 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1666 Dere-ChrDere05 26394751 26397156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1666 393 796 Receptor kinase-like Gene Family AT5G55830 33.333 1.09e-62 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dere05g1666 Pkinase 2.6e-54 CL0016