Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1665 ATGCATATCCTAAACTTTCTCTTCCTTCTATTTGTACTGTGGATTCCTGCCCCATGTTCATCTGCAGCGTCACATACCCTTCCAGAAGGCTCATCTCTCTCGGTTGAGAAACCAAATGATACTCTGGTCTCAGCCAATGGCGTCTTCTCCGCTGGCTTCTTTCAAGTGGGTGATAATGCTTTCTGCTTTTCCATATGGTTCGTAAAGTCCAAACAACCCACCCTTGTTTGGATGGCAAATCGAGACGAACCCGTTAATGGGAAAGCTTCAAAATTAACACTTACCAAAAATGGCAATCTCATTTTGAACGATGCAGGAGCAACCACCATTTGGACTACCACGACCTTCTCCTCTTTGGAGGTGCAACTCAAGCTCATGAACAACGGCAACCTCGTCCTTCGTACTTTACAAGGCACTGTCTTATGGCAAAGCTTTGACTCCCCAACCGATACCCTCCTTCCCGGTCAAACTCTCACCGAAAAAGCAAGCCTTATTTCATCCAGAAGCGCCACCAATTTTTCCTCTGGTTTCTACAAGCTTTATTTCGACAACGATAATGTTCTTCGCCTTCTTTTCAAAGGCCCTAACGTTTCCAGCGTGTACTGGCCAGAACCGTGGAAACTTCCCGTTGATGCAGGCAGGTCCACCTACAACATAACTAAAATTGCGGTGCTTGATCCCTTTGGCCATTTCACGTCCTCTGATACATTCGAATTCTATCCGTCTGATTACGGTGTAAGACGATATAGACGATTCGTGGTGGATCCTGATGGTGACTTGCGTCTCTATAGCTTGAACGAAGAAAATAACACGTGGGAGGTTTCATGGCAATCCATATCCCAACCATGTACCATTCACGGTATTTGTGGAGCTAACAGCATGTGCACTTACCATCCTTTCTTGGGCAGGACTTGCTATTGCTTGCAAGGATATACGATGAAGAATCCCAACGACTGGACTCAGGGTTGTGAGCCTCAATTTACAACCCCCTCTTGCAATCCCGCTGAGTTCGGTTTCGTCCGTCTTCCCAGCATGGAATTATTCGGCTATGACTTGGAGATGATCCGCGTTTCAAACTTCACACAATGTGAAAGTAGGTGCTTGGAACTTTGTGATGTTTGCAAAGGTGTCCAATTCAAATTCAACGAAGTTAGTACTTACAATTGTTACATTAAAACAATATTGCTCAACGGAAGGGATTCCCCCAATTTCGATGGAGATATCTATCTCAAATTGCCAAAATCCACTCTGCTCTCCTCCAAGGATCCTCTGAAACATGTACCACTGAAGTGCTCAGCTGGTCAGTTTCAACGCTTGGATAGAATTTATGAAAATCCCAAACAAAGCGCATGGTTGAATTTCTTGCTTTGGTTCGCTAGCGGGATTGGGGCGCTTGAGATTACTTGCGTTTTCCTCGTCTGGTTCTTCTTGTTTAGAAGCAGTAAGCAAAACGATAGAGGAGAAAGACAGCAACCACTTTCTGCTACAGGATTTCAAAGGTTCAGCTATTCAGAGCTCAAAAGGGCCACGCGTGGATTCAGCGACGAGATTGGACGAGGAGCGGGAGGGATCGTGTACAAAGGGAAGTTAGACAATAACCGTGTGGCAGCAATCAAACGCCTTATAATGGAAGCCAGTCAAGGAGAAGCAGAGTTTCTGGCTGAAATAAGCACGATCGGGATGTTGAACCATATGAATTTGATAGACATGTGGGGGTACTGCGTGGAGGGGAAGCACCGGCTGTTAGTGTACGAGTACATGAAGCATGGATCCTTAGCAGAGACTCTCTACTCCGATGCACTCGACTGGAACAAGAGGTTCAATATTGCAGTGGGCACAGCTAAAGGTTTAGCTTACTTGCACGAAGAGTGCTTGGAATGGGTGCTGCATTGCGATGTGAAACCTCAAAACATACTCATAGATTCTGAGTTCCAACCCAAGGTAGCAGATTTTGGCTTGTCTAAACTGCTCAATAGAGATGAGCGTGCCAATTCTGGGTTTTCCAGAATAAGAGGGACCAGAGGTTACATGGCTCCGGAATGGGTGTACAATCTTCAAATTACATCTAAAGTGGACGTGTATAGCTATGGGATTGTGGTGTTGGAAATGATAACTGGAAAGAGCCCAATGGGAGTCTTTAGCCTAGAAAACAATGGGGGAATAGATCAACGCAGGTTGGTCACATGGGTGAAAGAGAAGATAAATGGTGCTCCTACAAGCAAGTTTTGGATTGAGGAGATTGCAGATCCCAGTATGCAAGGACAATACGACACCGCCAAGGTTGAGCTATTGGTGAAAGTGGCTTTGCGATGTGTGGAAGATGACATGCATGAAAGACCCACAATGAGCCGAGTAGTGGAGATGCTTCAGTCATCTGAATATAGATCCATCCAATAA 2397 0.4543 MHILNFLFLLFVLWIPAPCSSAASHTLPEGSSLSVEKPNDTLVSANGVFSAGFFQVGDNAFCFSIWFVKSKQPTLVWMANRDEPVNGKASKLTLTKNGNLILNDAGATTIWTTTTFSSLEVQLKLMNNGNLVLRTLQGTVLWQSFDSPTDTLLPGQTLTEKASLISSRSATNFSSGFYKLYFDNDNVLRLLFKGPNVSSVYWPEPWKLPVDAGRSTYNITKIAVLDPFGHFTSSDTFEFYPSDYGVRRYRRFVVDPDGDLRLYSLNEENNTWEVSWQSISQPCTIHGICGANSMCTYHPFLGRTCYCLQGYTMKNPNDWTQGCEPQFTTPSCNPAEFGFVRLPSMELFGYDLEMIRVSNFTQCESRCLELCDVCKGVQFKFNEVSTYNCYIKTILLNGRDSPNFDGDIYLKLPKSTLLSSKDPLKHVPLKCSAGQFQRLDRIYENPKQSAWLNFLLWFASGIGALEITCVFLVWFFLFRSSKQNDRGERQQPLSATGFQRFSYSELKRATRGFSDEIGRGAGGIVYKGKLDNNRVAAIKRLIMEASQGEAEFLAEISTIGMLNHMNLIDMWGYCVEGKHRLLVYEYMKHGSLAETLYSDALDWNKRFNIAVGTAKGLAYLHEECLEWVLHCDVKPQNILIDSEFQPKVADFGLSKLLNRDERANSGFSRIRGTRGYMAPEWVYNLQITSKVDVYSYGIVVLEMITGKSPMGVFSLENNGGIDQRRLVTWVKEKINGAPTSKFWIEEIADPSMQGQYDTAKVELLVKVALRCVEDDMHERPTMSRVVEMLQSSEYRSIQ 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1665 798 SMART serkin_6 511 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1665 798 SMART ntp_6 334 412 IPR003609 -
Dere05g1665 798 Pfam D-mannose binding lectin 74 161 IPR001480 -
Dere05g1665 798 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 203 IPR036426 -
Dere05g1665 798 SUPERFAMILY Protein kinase-like (PK-like) 489 790 IPR011009 -
Dere05g1665 798 CDD PAN_AP_plant 328 413 - -
Dere05g1665 798 SMART blect_4 33 148 IPR001480 -
Dere05g1665 798 PIRSF SRK 1 797 IPR024171 GO:0004674
Dere05g1665 798 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Dere05g1665 798 CDD STKc_IRAK 517 790 - -
Dere05g1665 798 Gene3D Phosphorylase Kinase; domain 1 477 586 - -
Dere05g1665 798 FunFam S-receptor-like serine/threonine-protein kinase 480 586 - -
Dere05g1665 798 ProSitePatterns Protein kinases ATP-binding region signature. 517 539 IPR017441 GO:0005524
Dere05g1665 798 PANTHER OS07G0415500 PROTEIN 7 791 - -
Dere05g1665 798 ProSiteProfiles Protein kinase domain profile. 511 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1665 798 Pfam Protein kinase domain 515 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1665 798 CDD B_lectin 37 148 IPR001480 -
Dere05g1665 798 Gene3D Transferase(Phosphotransferase) domain 1 587 797 - -
Dere05g1665 798 FunFam Serine/threonine-protein kinase 587 796 - -
Dere05g1665 798 Pfam S-locus glycoprotein domain 244 314 IPR000858 GO:0048544
Dere05g1665 798 Gene3D - 20 147 IPR036426 -
Dere05g1665 798 ProSiteProfiles PAN/Apple domain profile. 332 413 IPR003609 -
Dere05g1665 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1665 Dere-ChrDere05 26386548 26388944 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1665 453 790 Receptor kinase-like Gene Family AT5G45780 36.311 9.76e-65 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dere05g1665 Pkinase 8e-52 CL0016