Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1652 ATGGCTGTAGAGCTTATATCGGGTTATGGGGATGATAGTTTTGGAGGCAGGACGGATGACAATACGATTGCGGTGCAGGAAGCTGCAGCTGCAGGCATTCATAGCGCCGAGAAGCTCATGACAATGATTTCTCAACAACGCCATCGCCAAGACCAAGAGGAGGAGGCTTCTAGCTCCAGAGGGCCTTCGGAAATGGAAGCCGTAGCAGACATGGCTATGAACAAGTTCAGAAGGGTCATTTCTCTGCTGGATAGGCCAAGAACAGGTCACGCTCGTTTCAGAAAAGCTCCTACAACGCTGCCATCGATTCCTCTTCTCCAATTACAGCAAACGCTGGATTCGGAAACCCGCGTGCCTTCTGTCCCAGAACGCCAACAAATCAAAACAGAGCAAACCTCTGCTTTCAAGGTCTATTGCCCTACACCGATTTTACGTCTCCCGCCTCTGCCTCACCAGGCAAACCAACCTTCCTCATTCAATCGGGTGGAGAAGAAGGAAGCAAATGGTAGTATCCCATTCTCGGCGTCGACGCCTTCAGTTTCCGCTGCCAATTCGTATATGTCTACGTTAACGGGGGATACTGAAAGTCTGCAACAACCATGTCATTCTTCGGGGTTCCAAATCACTCACAATCATAGGACACAGCAGGGACCCTACATGGGCAAGCCACCTCTGTGTTCAAATTCTCTAAAGAGGAAGTGCAATTCAATGGACGACGCCGCTGTCAAGTGTGGATCATCCTCTGGGCGATGCCATTGCTCCAAGAAAAGGAAATCAAAGATAAGGAGAGTAATTAGAGTGCCAGCAATCAGCTCGAAGATGGCTGACATACCAGCTGATGATTACTCGTGGAGAAAATACGGACAAAAACCCATCAAGGGTTCTCCTCACCCCAGGGGTTATTACAAGTGTAGTAGCGTGAGAGGCTGCCCGGCACGCAAACACGTGGAGCGTGCTCTGGACGATCCTAACATGCTCGTTGTCACCTACGAAGCAGATCATAATCACTCTCGCGAGGTTGCAGCGGCCGTCGTCCTCGAATCTTCCTAG 1050 0.5038 MAVELISGYGDDSFGGRTDDNTIAVQEAAAAGIHSAEKLMTMISQQRHRQDQEEEASSSRGPSEMEAVADMAMNKFRRVISLLDRPRTGHARFRKAPTTLPSIPLLQLQQTLDSETRVPSVPERQQIKTEQTSAFKVYCPTPILRLPPLPHQANQPSSFNRVEKKEANGSIPFSASTPSVSAANSYMSTLTGDTESLQQPCHSSGFQITHNHRTQQGPYMGKPPLCSNSLKRKCNSMDDAAVKCGSSSGRCHCSKKRKSKIRRVIRVPAISSKMADIPADDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPNMLVVTYEADHNHSREVAAAVVLESS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1652 349 MobiDBLite consensus disorder prediction 43 64 - -
Dere05g1652 349 FunFam WRKY transcription factor 65 262 339 - -
Dere05g1652 349 ProSiteProfiles WRKY domain profile. 273 339 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere05g1652 349 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 25 340 IPR044810 GO:0003700
Dere05g1652 349 Pfam Plant zinc cluster domain 231 276 IPR018872 -
Dere05g1652 349 SMART WRKY_cls 278 338 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere05g1652 349 Gene3D WRKY domain 264 338 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere05g1652 349 Pfam WRKY DNA -binding domain 280 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere05g1652 349 SUPERFAMILY WRKY DNA-binding domain 276 337 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1652 Dere-ChrDere05 26242077 26243397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1652 24 299 WRKY Transcription Factor Family AT4G24240 47.458 4.51e-71 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere05g1652 WRKY 3.1e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1652 05 26242077 26243397 Dere05g1652 05 26242077 26243397 ECH