Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1651 ATGAACAGGATTCCCAAAAAGATTCTACTTTCAACTTTATGCATCTTCACATTGTCCTTTCCTGTCCACATTTCAGCACATGACGCTCACACAGGCACACTCAATTTCAACAGTGGCTACAGCAGCAAAGATGGTGGAGGTGAGGTCTTTAGCAAAAGCTGCAACAATGAATTCGACCCAATACCTCTCAAATCCCCGTGTCAAAAATCACTAGGCTTTGAAGTATCTCCAACTTTGCCTCTCCAAACAGATGCTTTGGTATTTGCAGACCAAAGGCTTGAAGTTGTGTACCCCGTTATCCAAAAATTCAAGTCCATCATCACCTCTGATCCCCTGGGCGTCACCAAATCATGGGTAGGCTCTGATATATGCAGCTACAAAGGTTTCTACTGTGACAATCCCCCAGACAACAGCTCAGCCATTGCTGTGGCCTCCATTGATTTCAATGGATTCCAACTTGGTGCACCTGCCCTTGACGGCTTCATCGATCAGCTTCCTGATATTGCTCTCTTCCATGCAAACTCCAACAGTTTTAGGGGCACCATCTCCCCCAAAATCTCCAAGCTCCCTTATCTTTACGAGCTTGATGTAAGCAACAACCAACTGTCTGGTCCGTTTCCCACGGCTGTCCTGGGTATGATCACCCTAACATTCCTGGACATTCGCTTCAATATGTTCTCTGGGGCTGTCCCACCGCAGATATTCACCCAGAATCTCGATGCCCTCTTCATCAACGACAATGACTTCACTCAGAGATTGCCTGATAACTTAGGCAACACTCATATTCTTTACCTCACCTTAGCGAATAACAAATTCATGGGTCCAATACCTAGAAGCCTTCCCAAAGCCTTGTCCTCTCTCACCGAGGTTCTATTCCTGAACAACCGATTAACAGGTTGTCTTCCTTATGAGATTGGGTTTCTTGAAGAGGCCAGAGTGTTTGATGCTGGAAACAACCAGCTAACAGGCCCACTCCCCATGTCTTTGGGTTGCCTTGAGAATGTGGAGCTCCTCAATTTGGCTGGTAATCTACTGTATGGTATGGTGCCGGAAGTGGTGTGTGGACTGGAAAATTTGGTCTATTTATCACTTTCAGATAATTATTTCACCTACGTAGGACCCCTGTGTAGGACCTTAATTCAGAGTGGGGCTCTTGATATTAGGAACAACTGCATTCCCGATCTTCCATTCCAGAGATCAGTGCCTGAGTGTGCAACTTTCTTTGCGCACCCAAGAATGTGCCCCCACATGTGGTTTCATAGTTTCATTCCTTGCAAGCTTCCTTTCCACAAATCTTCGGTTTCTGCGATTCCTGAGATATCTCCTTCTCCTTAA 1335 0.4584 MNRIPKKILLSTLCIFTLSFPVHISAHDAHTGTLNFNSGYSSKDGGGEVFSKSCNNEFDPIPLKSPCQKSLGFEVSPTLPLQTDALVFADQRLEVVYPVIQKFKSIITSDPLGVTKSWVGSDICSYKGFYCDNPPDNSSAIAVASIDFNGFQLGAPALDGFIDQLPDIALFHANSNSFRGTISPKISKLPYLYELDVSNNQLSGPFPTAVLGMITLTFLDIRFNMFSGAVPPQIFTQNLDALFINDNDFTQRLPDNLGNTHILYLTLANNKFMGPIPRSLPKALSSLTEVLFLNNRLTGCLPYEIGFLEEARVFDAGNNQLTGPLPMSLGCLENVELLNLAGNLLYGMVPEVVCGLENLVYLSLSDNYFTYVGPLCRTLIQSGALDIRNNCIPDLPFQRSVPECATFFAHPRMCPHMWFHSFIPCKLPFHKSSVSAIPEISPSP 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1651 444 SUPERFAMILY L domain-like 100 392 - -
Dere05g1651 444 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 59 427 - -
Dere05g1651 444 Gene3D Ribonuclease Inhibitor 98 407 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1651 Dere-ChrDere05 26231411 26232745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1651 85 413 Leucine-rich Repeat extension Gene Families AT3G24480 44.073 5.19e-88 275