Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1648 ATGGCCTCAGCTGTCCTGAATATTCTGAACACTACAGTAGAATGGGTGACATTGGCTTTAGATGCTCCTTCTGCACGAGCTGTAGTTTTTGGAGTGCATATTGGCGGGCATTTATTTGTTGAAGTTGTTCTTCTGGTGGTCATTCTTTTCCTGCTCTCCCAGAAAAGTTACAAGCCTCCCAAACGACCCTTGAGAGAGAAGGAAATAGATGAGCTATGTGATGAATGGGTTCCAGAATCCCTGATTCCTCCACTAAGTAAAGAGATGCAGTATGAACCACCAGTGCTGGAGAGTGCTGCTGGGCCACATACCATAATTAATGGTAATGATGTTATTAATTTTGCCTCGGCTAACTATCTTGGATTGATAGGTCATAAGAAGCTACTTGAGTCATGTTCTTCTGCTGTAGAGAAATATGGTGTTGGTTCTTGTGGTCCTCGTGGATTTTATGGAACAATCGATGTCCACCTTGATTGTGAAGCCAGAATAGCAAAATTTTTGGGAACACCTGATTCAATTCTCTACTCTTATGGACTTTCCACCATGTTCAGTGCAATTCCTGCTTTCTCTAAGAAAGGAGATATAATTGTTGTAGATGAAGGAGTCCACTGGGGGATACAGAATGGCCTTTATCTTTCAAGAAGCACAGTGGTGTATTTTAAGCACAATGACATGAATTCTTTAAGAGAAACTCTGGAAAAAATCACTGCAGAAAATAAGCGGGCCAAGAAGTTGAGGCGGTACATTGTTGTTGAAGCTGTCTACCAGAATTCTGGCCAAATTGCACCCTTAGATGAGATCATTAGATTGAAGGAGAAATACCGTTTTCGTGTTTTGCTGGATGAGAGCAACTCAATTGGTGTGCTTGGAGGTTCTGGAAGAGGACTTACTGAATATTTTGGAGTTCCAGTTGAGAAGTTAGATATCATAACTGCTGCTATGGGACATGCACTGGCCACAGAAGGCGGATTCTGCACCGGAAGTGCTAGAGTTATAGATCACCAACGATTAAGTAGCTCTGGCTATGTCTTTTCTGCTTCTCTGCCCCCATATCTTGCAAGCGCTGCAATTACGGCTATTGACATCCTTGAGGACAATCCAAATCTGATAACAAAGCTGAAGACTAACATTTCTGTCCTATGGAAAGGATTATCAAACATACAAGGCTTGATAATAGCAAGTAATGCAGAATCACCAATTGTTTATTTGAGATTAGAGAAGTCAACAGGTTCCATGAAAAATGACATACGACTGCTTGAAGATATAGCTGAGCGTGTTTTGGAGGAAGATTCTGTATTTGTGGTTGCTTCCAAAAGATCAACTTTGGACAAATGCCGTTTGCCTGTAGGAATTAGATTATTTGTCTCGGCAGCTCATTCAGACTCCGATCTTCGTAAGGCAGCTGAATCGTTGAAGAGGGTTGCAGCATTAGTCCTGAATGGTCACGTTTGA 1452 0.418 MASAVLNILNTTVEWVTLALDAPSARAVVFGVHIGGHLFVEVVLLVVILFLLSQKSYKPPKRPLREKEIDELCDEWVPESLIPPLSKEMQYEPPVLESAAGPHTIINGNDVINFASANYLGLIGHKKLLESCSSAVEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPAFSKKGDIIVVDEGVHWGIQNGLYLSRSTVVYFKHNDMNSLRETLEKITAENKRAKKLRRYIVVEAVYQNSGQIAPLDEIIRLKEKYRFRVLLDESNSIGVLGGSGRGLTEYFGVPVEKLDIITAAMGHALATEGGFCTGSARVIDHQRLSSSGYVFSASLPPYLASAAITAIDILEDNPNLITKLKTNISVLWKGLSNIQGLIIASNAESPIVYLRLEKSTGSMKNDIRLLEDIAERVLEEDSVFVVASKRSTLDKCRLPVGIRLFVSAAHSDSDLRKAAESLKRVAALVLNGHV 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1648 483 FunFam serine palmitoyltransferase 1 isoform X1 125 366 - -
Dere05g1648 483 Pfam Aminotransferase class I and II 110 471 IPR004839 GO:0009058|GO:0030170
Dere05g1648 483 Gene3D - 125 366 IPR015421 GO:0003824
Dere05g1648 483 SUPERFAMILY PLP-dependent transferases 78 475 IPR015424 -
Dere05g1648 483 PANTHER CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE 36 474 - -
Dere05g1648 483 Gene3D Aspartate Aminotransferase, domain 1 104 469 IPR015422 GO:0003824
Dere05g1648 483 Coils Coil 225 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1648 Dere-ChrDere05 26203200 26208662 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1648 1 335 Acyl Lipid Metabolism Gene Families AT4G36480 77.313 0.0 563