Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1637 ATGAACCCCCCTGCCGTACGACGCATCTCTGAATGCTTCATCAAACCACACCGTCCGCTGGATCAGTCCAGACACAAATTCTATCTGAATCCATTTGATATTATCATGTTGTCTGCCCACTACATCCAGAAAGGCCTCCTCTTCCAGAAGCCTCCTCCTCCACTCGATCATCAACATTTTATCCACATGCTTCTCGATCGACTCAAGCACTCCCTCTCTCTCGCCCTCTTCCATTTCTATCCCCTTGCAGGCCGCTTGGTCACCCAACGAACCCAACATCCTCCCTCCTACACCATCTTCGTCGATTGCAACAACAGTGAGGGCGCTAGATTTATCTATGCTACTTTAGACATGACCATATCCGACATCCTCTCCCCCCTCCATGTCCCCTTGGTTGTCCAATCCTTCTTTGACCATGACAGAGCAGTCAACCACGACGGTCACACCTCACCTTTGTTGTCCATTCAAGTCACCGAATTAATAGACGGCGTCTTCATAGGGTGTTCCATGAACCATAGCCTCGCCGATGGAACTTCCTACTGGAGATTCTTCAATTCATGGTCTGAAATCTTTCGAGCACAAGCCGATCATAGATATGAAATCGATGATATTCATATTCCCATCTCGCGTCCCCCGATTCTCAATCGTTGGTTCCCTGAGGGTTGTGGTCCGCTAATCAATCTTCCCTTCAAACATCAAGACGAGTTCAATAGCAGATTCGAAGGACCCCCGCTTAGAGAGAGAATATTCCACTTCGCATCAGATTCCATTGCGAAGTTAAAAGCCAAAGCCAACCACGAGTCCAACACCACCAAGATATCTTCGTTCCAGTCCTTGTCGGCACTGGTATGGAGGTGCATAACACGCGCGCGCGGACTCCCGCATGGTCTGAGAACGACATGCAAGTTGGCGGCTAATAACAGACTAAGAATGGAACCGTCGCTGCCGGAGGAGTACTTCGGGAACTCGATTCACGCGCTGAGTACCGAAACGACGTCAGGGGAGTTGCTAGAGCACGACCTTGGATGGGCGGCGTGGAAGGTACACGTGGCAGTTGCGAACCATGGTGACAAGGCGGTGCGTGAGGCTGTGAAAGGATGGTTGGAGAGTCCGATGGTGTTTCAGATGGGTCGGTTTTTTGACCCTTTCACTGTGATGATGGGGAGCTCACCCAGATTCGACGTGTACGGCAATGAATTTGGAATGGGAAAGGCGGTGGCTGTTCGAAGTGGGTATGCCAACAAATTTGATGGCACAGTGACGTCGTATCCTGGTTCTGAAAGAGGGGGAAGCATCGATTTGGAAGTGTGTCTTCCCCCTCATTCCATGAATGCGCTTGAAGCAGATGAGGAGTTCATGAATTCAGTCTCCCTCTCCTTGTAG 1383 0.504 MNPPAVRRISECFIKPHRPLDQSRHKFYLNPFDIIMLSAHYIQKGLLFQKPPPPLDHQHFIHMLLDRLKHSLSLALFHFYPLAGRLVTQRTQHPPSYTIFVDCNNSEGARFIYATLDMTISDILSPLHVPLVVQSFFDHDRAVNHDGHTSPLLSIQVTELIDGVFIGCSMNHSLADGTSYWRFFNSWSEIFRAQADHRYEIDDIHIPISRPPILNRWFPEGCGPLINLPFKHQDEFNSRFEGPPLRERIFHFASDSIAKLKAKANHESNTTKISSFQSLSALVWRCITRARGLPHGLRTTCKLAANNRLRMEPSLPEEYFGNSIHALSTETTSGELLEHDLGWAAWKVHVAVANHGDKAVREAVKGWLESPMVFQMGRFFDPFTVMMGSSPRFDVYGNEFGMGKAVAVRSGYANKFDGTVTSYPGSERGGSIDLEVCLPPHSMNALEADEEFMNSVSLSL 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1637 460 Pfam Transferase family 8 453 - -
Dere05g1637 460 Gene3D - 231 448 IPR023213 -
Dere05g1637 460 Gene3D - 8 225 IPR023213 -
Dere05g1637 460 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 454 - -
Dere05g1637 460 FunFam Tryptamine hydroxycinnamoyl transferase 231 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1637 Dere-ChrDere05 26105700 26107082 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1637 68 447 Monolignol Biosynthesis Gene Families AT5G48930 27.708 2.99e-34 131