Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1634 ATGAATCCCCCTACCGTCCGACGCATCTCGGAATGCTTCATTAAGCCACACCTCCCACTGGACCAGTCCAACCACATATGCTATCTAAATCCATTAGATATTGCTATGATGTCTGTCCATTTCATCCAGAAAGGCCTCCTCTTCCACAAGCCTCCTCCTCCACTCAATCATCAACATTTCATCCACACGCTTCTCGATCGACTCAAGCACTCCCTCTCTCTCGCCCTCTTCCATTTCTATCCCCTCGCAGGCCGCTTGGTCACCCAACAAACCCAACATCCTCCCTCCTACACCATCTTCGTTGATTGCAACAACAGTGAGGGCGCTAGATTTATATATGCTACTTTAGACATGACCATATCCGAAATCCTCTCCCCCCTCCATGTCCCCTTGGTAGTCCAATCCTTCTTTGACCATGACAGAGCAGTCAACCACGACGGTCATACCGTACCTTTGTTGTCCATTCAAGTCACCGAATTAATAGACGGCGTCTTCATAGGGTGTTCCATGAACCATAGCCTTGCCGACGGAACTTCCTACTGGAGATTCTTCAATACATGGTCTGAAATCTTTCGAGCACAATCCGATCATAGGTATGATATCGATGATGTTCATATTCCCATCTCGCGTCCACCGATTCTCAATCGTTGGTTCCCTGAGGGTTGTGGTCCGCTAATCAATCTTCCCTTCAAAAATCATGACGAATTCATTAGCAGATTTGAAGCACCCCCGCTTAGAGAGAGAATATTCCACTTCACATCAGATTCCATTGCGAAGTTAAAAGCCAAAGCCAACCACGAGTCCAATACCACCAATATATCTTCGTTCCAGTCCTTATCGGCACTGGTATGGAGGTGCATAACACGCGCGCGCGGACTCCCGCTTGGTCAGAGAACGACATGCAAGTTGGCGGCCAATAACAGACTAAGAATGGAACCGTCGCTGCCGGAGGAGTACTTCGGGAACTCGATTCACGCGCTGAGTACCGAAACGACGTCGGGGGAGTTGCTAGAGCGTGACCTTGGATGGGCGGCGTGGAAGGTACACGTGGCGGTTGCGAACCATGGTGACAAAGCGGTGCGTGAGGGTGTGAAAGGGTGGTTGGAGAGTCCGATGGTGTATCAGTTGGATCGGTTTTGTGACCCGTTCACTGTGATGATGGGGAGCTCACCCAGATTCGACATGTACGGCAATGAATTTGGAATGGGAAAGGCGGTGGCTGTTCGAAGTGGTTATGCCAACAAATATGATGGCAAAGTGACGTCGTATCCTGGTTCTGAAGGAGGGGGAAGCATCGATTTGGAAGTGTGTCTTCCCCCTCATTCCATGAATGCGCTTGAAGCAGATGAGGAGTTCATGAATTCAGTCTCCCTCCCTATGTAG 1383 0.4975 MNPPTVRRISECFIKPHLPLDQSNHICYLNPLDIAMMSVHFIQKGLLFHKPPPPLNHQHFIHTLLDRLKHSLSLALFHFYPLAGRLVTQQTQHPPSYTIFVDCNNSEGARFIYATLDMTISEILSPLHVPLVVQSFFDHDRAVNHDGHTVPLLSIQVTELIDGVFIGCSMNHSLADGTSYWRFFNTWSEIFRAQSDHRYDIDDVHIPISRPPILNRWFPEGCGPLINLPFKNHDEFISRFEAPPLRERIFHFTSDSIAKLKAKANHESNTTNISSFQSLSALVWRCITRARGLPLGQRTTCKLAANNRLRMEPSLPEEYFGNSIHALSTETTSGELLERDLGWAAWKVHVAVANHGDKAVREGVKGWLESPMVYQLDRFCDPFTVMMGSSPRFDMYGNEFGMGKAVAVRSGYANKYDGKVTSYPGSEGGGSIDLEVCLPPHSMNALEADEEFMNSVSLPM 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1634 460 Gene3D - 8 224 IPR023213 -
Dere05g1634 460 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 454 - -
Dere05g1634 460 FunFam Tryptamine hydroxycinnamoyl transferase 231 449 - -
Dere05g1634 460 Pfam Transferase family 8 453 - -
Dere05g1634 460 Gene3D - 233 448 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1634 Dere-ChrDere05 26075148 26076530 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1634 68 447 Monolignol Biosynthesis Gene Families AT5G48930 28.250 1.31e-36 137
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1634 05 26075148 26076530 Dere05g1634 05 26075148 26076530 ECH