Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1609 ATGGATGCACTTCTTGCTTACATTCTTGTCTTTTTACTTACCCTATGCTCTTCCATCTTCTTATTCTTAAACAGACAAAAAAGAAAACCCCATACAAGTGCAGAGCTTCCTCCTGGTTCAATGGGATGGCCGTACATAGGAGAAACTCTTCAACTCTACTCCCAGCCCCCAAATGTTTTCTTCGCCGCCAAACAGAAAAGGTACGGCGAAATATTCAAGACCAATATTCTTGGTTGTCCATGTGTGATGCTGGCTAGCCCTGAGGCAGCACGCTTTGTGCTCGTGACTCACACTCACTTGTTCAAGCCCACGTACCCTACAAGCAAGGAACGCCTTATTGGCCCCTCTGCTCTGTTTTTCCACCAAGGTCACTACCATATGCGTTTGAGGAAGCTCATTCAGGATTCCCTCTCCCTTGAATCACTTCGCAAATTGGTGCCCCATATTGAAGCCTTGGCTGTTTCTGCCATGAATTCTTGGGTTGACGCTCCCGTCATTAACACATTTATTGAAATGAAAAGATTTTCTTTTGAAGTGGGTATCCTCACGGTTTTCGGCCATCTGGACCCCCGGTTTAAAGAGGAGCTAAAGAAGAACTACTGTGTAGTAGACAGGGGCTACAATTCCTTTCCCACTAGCATTCCAGGAACCCCGTTCAAGAAGGCACTGGTGGCAAGAAAGAGACTTGACAAGATTATAAGAGATATAATTAGTGAGCGGAAAGAGAAGAAATTACCTGAAAAGGATCTCTTGGGCTGCCTATTGAGCTGGAAAAATGAGAACGGAGAAGTCTTAAGCGATGAGGAAATCTCAGATAACATTATTGGGGTGCTGTTTGCTGCTCAAGACACTACAGCTAGTGTCATGACATGGATAATAAAATACCTGCACGATGAGCCCAAACTTCTGGAAGCTGTAACGGTGGAACAGAAGGCTATTCACAGGTCAAATAATGAAGGTAACCTACCACTGAGTTGGGATCAGACTAGAAGCATGCGAGTTACCTACAAGGTCGTATTGGAGAGCTTGAGGATGGCAAGCATTATATCATTCACTTTCAGAGAAGCCGTGGCTGATGTAGAGTACAAGGGGTTCCTGATACCAAAAGGATGGAAAGCTATGCCTCTGTTTAGAAACATTCATCATAATCCAGATTTTTTCCCTGATCCTCAGAAATTTAACCCTTCAAGGTTTGAGGTGGCACCAAAAGCCAATACTTTTATGCCATTTGGTAGTGGAGTGCATGCCTGCCCCGGCAATCAGCTTGCTAAGCTGGAGATGCTGATTATGATCCACCATTTGGTCACGAAGTTTAGGTGGGAAGTGCAAGGATCCCAATTTGGGATTCAGTATTGGCCATTTCCAGTGCCAGTGAATGGACTACCAGCCAGATTTTGGAGAGAATCTACCAGCTAG 1416 0.4484 MDALLAYILVFLLTLCSSIFLFLNRQKRKPHTSAELPPGSMGWPYIGETLQLYSQPPNVFFAAKQKRYGEIFKTNILGCPCVMLASPEAARFVLVTHTHLFKPTYPTSKERLIGPSALFFHQGHYHMRLRKLIQDSLSLESLRKLVPHIEALAVSAMNSWVDAPVINTFIEMKRFSFEVGILTVFGHLDPRFKEELKKNYCVVDRGYNSFPTSIPGTPFKKALVARKRLDKIIRDIISERKEKKLPEKDLLGCLLSWKNENGEVLSDEEISDNIIGVLFAAQDTTASVMTWIIKYLHDEPKLLEAVTVEQKAIHRSNNEGNLPLSWDQTRSMRVTYKVVLESLRMASIISFTFREAVADVEYKGFLIPKGWKAMPLFRNIHHNPDFFPDPQKFNPSRFEVAPKANTFMPFGSGVHACPGNQLAKLEMLIMIHHLVTKFRWEVQGSQFGIQYWPFPVPVNGLPARFWRESTS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1609 471 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g1609 471 PRINTS E-class P450 group I signature 269 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g1609 471 PRINTS E-class P450 group I signature 336 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g1609 471 PRINTS E-class P450 group I signature 417 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g1609 471 PRINTS E-class P450 group I signature 407 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g1609 471 PRINTS E-class P450 group I signature 376 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g1609 471 Pfam Cytochrome P450 37 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g1609 471 SUPERFAMILY Cytochrome P450 34 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g1609 471 PRINTS P450 superfamily signature 408 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g1609 471 PRINTS P450 superfamily signature 280 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g1609 471 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g1609 471 PRINTS P450 superfamily signature 417 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g1609 471 PANTHER CYTOCHROME P450 26 33 456 - -
Dere05g1609 471 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 410 419 IPR017972 GO:0005506|GO:0016705
Dere05g1609 471 Gene3D Cytochrome P450 25 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere05g1609 471 FunFam Abscisic acid 8 26 467 - -
Dere05g1609 471 CDD CYP90-like 65 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1609 Dere-ChrDere05 25787866 25790644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1609 3 469 Cytochrome P450 AT3G19270 66.383 0.0 663
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1609 05 25787866 25790644 Dere05g1609 05 25787866 25790644 ECH