Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1601 ATGGCATCAGCAATTGGAAGAAGTTTCCCTTTACAGCCATGCACTTTATTTAAAAATTCGAGCATTAATAAATCTTCAGCAGGCGGGACATCCTCGTGGCTCAGGCATGCAGGTGCAGAAATTACGAAGCCTTGTAGGAGAACTTGTATTGCAGCTCAGCAGCGACCTACGTGGCTCCCAGGGCTCGATCCTCCACCTTATCTTGATGGAACTCTGGCAGGAGATTTTGGGTTCGACCCACTTGGACTTGGAGAGGACCCGAAAAGCTTGAAGTGGTATGTGCAAGCAGAGCTGGTTCATGCTCGCTTTGCAATGATTGGGGTCTCAGGAATTCTGCTGACAGATACACTTCGCGTTGCAGGACTTAAAACGATACCAATTTGGTATGAAGCCGGTGCAGGAAAATATTTTGCCAATACAGAGACTCTGTTCATTATCCAGCTATTTTTGATGGGCTTTGTTGAAACAAAAAGGTACATGGACTTCGTTAGTCCTGGATCTCAAGCTAAAGAGGGATCCTTCTTTGGATTGGAAGCTGCATTGGAAGGCTTAGAGCCAGGGTACCCCGGGGGCCCTTTGCTAAATCCTCTCGGCCTAGCTAAAGACATAAAAAATGCTCATGAATGGAAGCTTAAAGAAATTAAGAACGGGCGACTAGCAATGGTGGCAATGCTTGGCATCTTTGTGCAAGCTCCAGTGACTCATGTTGGACCAATTGATAACCTTGTGGAGCATCTTTCCAATCCATGGCACAAAACTATTATTCAAACCCTCGCCAGCTCTAGTTCTTAG 792 0.4609 MASAIGRSFPLQPCTLFKNSSINKSSAGGTSSWLRHAGAEITKPCRRTCIAAQQRPTWLPGLDPPPYLDGTLAGDFGFDPLGLGEDPKSLKWYVQAELVHARFAMIGVSGILLTDTLRVAGLKTIPIWYEAGAGKYFANTETLFIIQLFLMGFVETKRYMDFVSPGSQAKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIKNAHEWKLKEIKNGRLAMVAMLGIFVQAPVTHVGPIDNLVEHLSNPWHKTIIQTLASSSS 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1601 263 FunFam Chlorophyll a-b binding protein, chloroplastic 56 262 - -
Dere05g1601 263 Pfam Chlorophyll A-B binding protein 64 231 IPR022796 -
Dere05g1601 263 Gene3D Chlorophyll a/b binding protein domain 65 251 - -
Dere05g1601 263 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 34 258 IPR001344 GO:0009765|GO:0016020
Dere05g1601 263 SUPERFAMILY Chlorophyll a-b binding protein 49 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1601 Dere-ChrDere05 25693156 25694523 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1601 47 258 Chloroplast and Mitochondria Gene Families AT3G61470 46.948 6.12e-63 196