Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1582 ATGTCTACCAGGGGTGAACACCAAACCGTCCCCCTTTCGGTGCTTCTGAAGCGGGAATTGGCAAACGAGAAAATTGAGAAACCAGAAATTGTACATGGTCAAGCCAGCCAGAGCAAAAAAGGCGAAGATTTCACGCTATTAAAGACGGAATGCCAAAGGGTGGTGGGAGATGGGGTGTCTACTTATTCTGTTTTTGCGCTATTTGATGGGCACAATGGATCTGCCGCTGCTATTTATGCCAAGGAGAATCTCTTAAATAATGTTTTAAGTGCGGTTCCTCCAGATCTTAACAGAGAGGAGTGGGTGTCAGCATTGCCAAGGGCTTTGGTTGCTGGCTTTGTCAAAACTGATAAAGATTTTCAAGAGAAAGCACAAAAATCAGGAACAACAGTAACCTTTGTGATTATAGAAGGATGGGTTGTTACAGTGGCATCTGTTGGTGATTCCCGCTGCATACTTGAACCTTCTGAAGGTGGGATATATTACTTGTCAGCAGATCATAGGCTAGAAACTAATGAAGAGGAGAGGGTGCGTATTACTGCTAGTGGGGGTGAGGTCGGTCGTCTAAATACTGGTGGAGGTGCACAGGTTGGTCCTCTGAGGTGTTGGCCTGGTGGCTTGTGTCTTTCACGATCCATTGGTGATATGGATATTGGTGAATATATTGTCCCTGTACCCTATGTAAAGCAAGTGAAGCTGTCCACTGCTGGAGGCAGGCTAATTATCTGCAGTGATGGTGTTTGGGATGCTCTAACAGCAGAAGCGGCCCTTGATTGTTGTCGCGGCATGGCAGTAGATGCTGCAGCATCACATCTTGTTAGAGAAGCTTTACAAGCAAAGGGACTTAGAGATGATACAACCTGCATTGTTATTGATATATTACCTCAGGAGAAGCCACCTGCTCCTGTGCAACAATCAAAGAAAGCGGGAAAAATGTTTAAGGCCATGTTTCGCAGAAAGTCTTCTGAATCATCTTCTTATAATGACAAAGAGTACACGGAGCCAGATGTGGTAGAAGAACTGTATGAGGAAGGATCTGCTATGCTTGCAGAGAGGTTAGATACAAAATACCCACTCTGCAACATGTTCAAATTGTTTATGTGTGCAGTGTGTCAAATGGAGATGAAACCTGGGGAGGGTATTTCAATCCATGCAGGGGTACCCAATCCAGGAAAATTGCGTCCCTGGGATGGACCTTTCCTTTGCTTAAGTTGCCAAGAGAAGAAAGAAGCAATGGAAGGAAAAAGAACATCAGATAGACTTAGCAGTGGAAGTGACTGA 1281 0.4481 MSTRGEHQTVPLSVLLKRELANEKIEKPEIVHGQASQSKKGEDFTLLKTECQRVVGDGVSTYSVFALFDGHNGSAAAIYAKENLLNNVLSAVPPDLNREEWVSALPRALVAGFVKTDKDFQEKAQKSGTTVTFVIIEGWVVTVASVGDSRCILEPSEGGIYYLSADHRLETNEEERVRITASGGEVGRLNTGGGAQVGPLRCWPGGLCLSRSIGDMDIGEYIVPVPYVKQVKLSTAGGRLIICSDGVWDALTAEAALDCCRGMAVDAAASHLVREALQAKGLRDDTTCIVIDILPQEKPPAPVQQSKKAGKMFKAMFRRKSSESSSYNDKEYTEPDVVEELYEEGSAMLAERLDTKYPLCNMFKLFMCAVCQMEMKPGEGISIHAGVPNPGKLRPWDGPFLCLSCQEKKEAMEGKRTSDRLSSGSD 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1582 426 Pfam Protein phosphatase 2C 53 278 IPR001932 -
Dere05g1582 426 SUPERFAMILY PP2C-like 37 293 IPR036457 -
Dere05g1582 426 PANTHER PROTEIN PHOSPHATASE 32 292 IPR015655 GO:0004722|GO:0006470
Dere05g1582 426 FunFam probable protein phosphatase 2C 12 32 299 - -
Dere05g1582 426 SMART PP2C_4 21 291 IPR001932 -
Dere05g1582 426 CDD PP2Cc 39 293 IPR001932 -
Dere05g1582 426 Gene3D - 31 299 IPR036457 -
Dere05g1582 426 ProSiteProfiles PPM-type phosphatase domain profile. 24 293 IPR001932 -
Dere05g1582 426 SMART PP2C_SIG_2 46 293 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1582 Dere-ChrDere05 25432194 25436734 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1582 1 426 PP2C-type Phosphatase Gene Family AT1G47380 79.673 0.0 722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere05g1582 05 25432194 25436734 Dere04g0248 04 2540741 2544646 CCT
Dere05g1582 05 25432194 25436734 Dere05g1582 05 25432194 25436734 ECH