Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1567 ATGGATCAGAGAAATGAGGCCGAATTCTTGTGGGAAATTATGCGTTTACTAGATTGTGACCAAGACAGCAACCTCTGTTCAGAACACTCACTGTTTTTAGTTTCTGCTACCCTAGAAGAAAACAGAATGGTTTCAGTAAGCTATCTCAGCAATCTTGGTTTTGGATTCACAATTTCTCTGAAGGGCTATATGCCCCTCCAAAATGCACGAAATAAGCATCCTTTGGGCTACTTTTTGTACCACGATTGTTCTGCATTTCTACGCTCCCTACATCTTACCCAAGAGATGGAAGAGAAGAGAGAGCCTACATTGGCTAGTGATGCTACTTTCATCCCTAGTGGAAAGATTGGATGCATACGTTCTCACATATCTGAAGCTGGTGAAAAGAAAGAACGCAAAATGCACAGCTTCAGCTTCGACAGCAGAGTGGAGACCTCGCGTGGCGGAACTGTCATACGCAAAACTAAATCATTAAATACTCAATTCGTGATCAACATTGATGAGCTAATCAACAATGCTGCAGAAAGCTATCATAAGTTAGATTCCAATATTAATCGTTCCAGTAGCAATGAAATAAGATATTCCCTTTCCCTCACTACACCCACCTTACTCTCACATGAACTCTCAGATGTCTTGAGGCTGCCTAGTCCCAAATGCAAGGATGGATCATCTACTGTCCCTGCAGAGGAGGAACCAGGTTCACACAAGTGGAAAAGATTGCACATGGAACCTACCTTGCCAATATATCTCAAGTTTGAAGATGTGACTTACAAGGTGCCAGTGAAAGGCGTGAATAGTTCAGAAGAAGAAAAGTACATTCTGCATGGGATCACCGGTTCAGTATGCCCAGGAGAGATTCTTGCTCTTATGGGACCATCAGGAGGTGGTAAAACAACATTACTCAATATCTTGAGTAGAAGGATCAAATTTAACGGTGGTTCCATCACTTATAATGACAAACCTTATACCAAATCATTGAAGCAGAGGATTGGGTATGTGACACAAGATGATGTAGTGTTCCCTCATCTAACAGTCAAGGAAACTCTCACATATGCAGCTTTGCTCCGTCTCTCCAAGAGTCTGTCAAGAACACAGAAAAAAGAGAGGGCTATGAATGTTTTAAGTGAGCTATGCCTCGAAAGATGCCAAGATACAATCATTGGTGGCAAATTCATTCGAGGGGTTTCTGGGGGTGAGAGAAAAAGAGTCTCCATAGGCACAGAAATCCTGCTCAACCCATCACTCCTGTTCTTAGATGAACCAACAACTGGTCTTGATTCAACGACAGCATCACGAATTGTTCAGATTCTTCAGAATATTGCAAAAGAGGGAAAGACGGTGGTGACAACAATACACCAGCCATCAAGTAGGCTATTCAGCATGTTTGACAAACTGATTCTGTTGGGTAAAGGGAGCACCTTGTACTATGGAAAAGCATCTGATGCAATGATGTATTTCTCCTCTATTGGTTGTTCTCCATTGATAGCCATGAACCCTGCAGAGTTCCTCATTGACCTAGCAAATGGCAACATGAATGACAAATCTGTCCCTTCAGAACTTGAGGATAAATTCCAATATGGAATAAAAAAACTTGACCCAAAAAATAACACACCTTCCCCAGTTGATGTACATGAGTTTCTTGTAGAGACCTATGAAATAAAACTTGCGGAAAGGGAGAAAGCAAGGCTTTATGAACCTGTGGTAGTGAAGGGAGAGAGTGGGATGCGAGGCAGGCCATTCCTAAGGGACTTTGGAGCAACTTGGTCGGAACAATTTTGCATTCTCTTCAGAAGGGGCATTAGGGAGAGGCGTCATGAGTACTTCAGCTGTGTGCGTGTAACCCAAGCAGGACTATTGTTCTTTCTTTCAGTTTTCTGGGGCTTCTATCCTCTATTTAGTGCCGTTTTCATGTTCCCGCAAGAAAGAGCAATGCTAGTGAAAGAGAGATCAAATGACATGTACAAACTCAGCGCATACTTCTTAGCTAAAAACACTAGTGATGTTCCATTGGAGTTTCTAATGCCTGTAGTGTTCATGGTGATTGTGTATTTCATGGTTGGCTTGAAATTACAGTTCTCTGCATTTTTCCTTACCATGCTCACACTCTTTCTAAGTGTGCTGGCAGCTCAGGGTCTAGGACAAGCCATAAGTGCAGGGTTCCTCGATGTGAAGAAAGCAACAACACTAGCCTCAGTCATTGTTATGACCTTCATGCTAACTGGTGGATTCTTTAGCCAACAAGTCCCAGGGTTCATGTCATGGGTGCGATACGTCTCTTTCAACTTCCACACTTACAGGTTACTTATGAAAATTCAGTATGGTTGTGTTAGTTCAACCTCTGGATCAGGTTGCAGTGAGTCTCCTTCAATGAAAAAAAGTGACAGTATATTTGGGAGAGAAATGGAAGTCGGTGCTATGATAGTAATGATTATTAGTTATCGGCTAGTGGCTTATTTATTACTAAGGAGAATGAATCTGAGGACAAATTAA 2490 0.4205 MDQRNEAEFLWEIMRLLDCDQDSNLCSEHSLFLVSATLEENRMVSVSYLSNLGFGFTISLKGYMPLQNARNKHPLGYFLYHDCSAFLRSLHLTQEMEEKREPTLASDATFIPSGKIGCIRSHISEAGEKKERKMHSFSFDSRVETSRGGTVIRKTKSLNTQFVINIDELINNAAESYHKLDSNINRSSSNEIRYSLSLTTPTLLSHELSDVLRLPSPKCKDGSSTVPAEEEPGSHKWKRLHMEPTLPIYLKFEDVTYKVPVKGVNSSEEEKYILHGITGSVCPGEILALMGPSGGGKTTLLNILSRRIKFNGGSITYNDKPYTKSLKQRIGYVTQDDVVFPHLTVKETLTYAALLRLSKSLSRTQKKERAMNVLSELCLERCQDTIIGGKFIRGVSGGERKRVSIGTEILLNPSLLFLDEPTTGLDSTTASRIVQILQNIAKEGKTVVTTIHQPSSRLFSMFDKLILLGKGSTLYYGKASDAMMYFSSIGCSPLIAMNPAEFLIDLANGNMNDKSVPSELEDKFQYGIKKLDPKNNTPSPVDVHEFLVETYEIKLAEREKARLYEPVVVKGESGMRGRPFLRDFGATWSEQFCILFRRGIRERRHEYFSCVRVTQAGLLFFLSVFWGFYPLFSAVFMFPQERAMLVKERSNDMYKLSAYFLAKNTSDVPLEFLMPVVFMVIVYFMVGLKLQFSAFFLTMLTLFLSVLAAQGLGQAISAGFLDVKKATTLASVIVMTFMLTGGFFSQQVPGFMSWVRYVSFNFHTYRLLMKIQYGCVSSTSGSGCSESPSMKKSDSIFGREMEVGAMIVMIISYRLVAYLLLRRMNLRTN 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1567 829 Gene3D - 250 488 IPR027417 -
Dere05g1567 829 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 221 818 - -
Dere05g1567 829 SMART AAA_5 283 472 IPR003593 GO:0016887
Dere05g1567 829 CDD ABCG_EPDR 247 477 - -
Dere05g1567 829 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 250 495 IPR003439 GO:0005524
Dere05g1567 829 Pfam ABC-2 type transporter 452 516 IPR043926 GO:0140359
Dere05g1567 829 ProSitePatterns ABC transporters family signature. 395 409 IPR017871 GO:0005524|GO:0016887
Dere05g1567 829 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 260 483 IPR027417 -
Dere05g1567 829 Pfam ABC-2 type transporter 614 773 IPR013525 GO:0016020|GO:0140359
Dere05g1567 829 Pfam ABC transporter 274 422 IPR003439 GO:0005524
Dere05g1567 829 FunFam ABC transporter G family member 22 261 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1567 Dere-ChrDere05 25286478 25290719 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1567 250 477 Calmodulin-binding Proteins AT2G36910 28.390 1.22e-14 76.6