Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1545 ATGGATTGCAACAAAGATGAGGCTGTTAGGGCCAAAGAAATAGCAGAGAAGAAATTTTCAGATAGGGAATATGCTGGTGCAAAGAAGTTTGCTCTCAAGGCTCTAAATTTGTATCCTGCACTGGAGGGTCTTTCACAATTTTTGACAACTCTTGATGTTTATATCTCTGCTGAGAATAAAGTAAGTGGAGAAATGGATTGGTATGGTATACTTGGAGTGAACCCCTTTGATGATGAAGAGACAGTTAGAAAACAGTACAGGAAGCTGGCTCTCACTCTTCACCCTGATAAAAACAAGTCTTTAGGTGCAGAGGGTGCATTTAAGCTGGTTTCAGAGGCGTGGAGTTTGTTGTCAGATAAAACCAAGAGACTAGAATATAATCAGAAGAGGAGTTTGAAAGGTTTTCAACATAACGCTCCCAACCATGTTGGGTCTCAGTCAGAAGTACCCAGTTCAAATGGTTTTTATAATTTTAACAATGTAACCTCAAATGTGAGGACTGGAAATAGTAATGCACAGGCACGTCACACCTCGGCTCCTCGTCAACAGAAAAAAGCTGACACCTTTTGGACTATTTGTAATCGGTGCAGGACTCATTATGAATATCTCAGGATTTATTTGAATCATAGACTTCTATGCCCCAATTGTAATGAGGCTTTCTTGGCTATAGAGAAGGATCCACCTCCCAATTATTTCAAGTCAACAAATTGGTCTTCTCGGCAACAGCATCAGAGTTCTCGACATCATGCAGCAAGTAATAACCGAGTTAATCAAGGAAGAAATTGTGTAGTTCCTCAGAACTCAGAAGGCAGTGGTTCTTCAGGCATGTCATCATTTAGTAAAACAAGTTTTCAGTGGGGTCCTCACTCTAGCATGGCTGGTTTTGGTGGTATGGACGGATCATCATCTGTTGCTGCTCAAGCTGCAAATGTTGTGCAGCAGGCTAGTGAGAAAGTGAGAAGAGAACGTGAGGGAGCACCATCAATTGCTGAATGGGAGAGGAGTCAAATGTCTAAGAGGACTGAAGGTTCTATTCATAAAGTGGAGAAACCTTTGAAGAAGAGGAGGACAGATGATTCTTGCATGAATGGTATTAAAGGATACACAGCAAATCACGTGGCAGGGGCGCATGGAGCAGCCAATTTGGGATATGTTTCTGATCCAAGGAAAGCTAATTGGGAAACTGAAAGAAGCCATGGTTTTTCAGGTACGAAGCCTAACAGTACAAGAGAGTTGTCATTGTTTGAAATACGAAACATGTTGGTGGGTAGGGCACAGACTGAACTGCGCAAGAAACTTGAAGAATGGAGATCAATAGCTCAATCTAAGATCACAAACAAGTCCAAAGAGAATAAGAGACAAAAAGGCACATCGACTGATCCAAGGAAGCCTAAAGAGTCTGCTCTTAATAATAGCTGGCATGAAGAAAGTGATTCTTTCCCTGTCACATCTGATAATGCAGTTAAGGAGGACCATTCCTATATGACAATCAATGTTCCAGACCCCGATTTCCACAATTTTGACTTGGATAGAGCAGAAAATTCCTTTGGTGAGGACCAGGTCTGGGCTGCATATGATGATGATGATGGAATGCCCCGATATTATGCTCGAATTCACAAGGTGATATCCATGAAACCGTTCAGAATGCGAATCAGTTGGCTTAACTCTAGAAGCAACAGTGAATTGGGTCCAATAGATTGGATAGGTGCTGGTTTTACTAAAACTTGTGGGGATTTTAGGACCGGCAGGCATGAAATTACTGAATCATTGAACTCATTTTCACACAAGGTTATGTGGACAAAAGGCACTAGAGGAGTTATTCGCATCTTTCCTATAAAAGGGGAAGTCTGGGCTCTTTATAGAGACTGGTCCCCTGATTGGAACCAACACACTCCAGATGAAGTGATACACAAGTATGATATGGTTGAGGTGCTTGAAGATTTTAATGAGGAGGAAGGTGTGTTAGTCACTCCACTGATTAAGCTTCCTGATTTTAGGACCGTGTTTTGCAGGCACTCGGACCCTGATCAGGTGATGAGGATACCCAAAGAGGAGATGTTTCGCTTCTCTCATCAGGTTCCTAACTACATGCTTACGGGCCAAGAAGCTGATAATGCCCCCAAGGGTTGTCGAGAGTTGGATCCAGCAGCTACACCTTTAGACCTCCTTCAGACAACAACGGAAGCTAATGAGGGATCCGATGATGTTCAAAAGCCTAAGGAAGGCACATTGCCCAATTCACCTGAAAGGAAGAATGCTTCAGAAACAAGGGCAGAACAGTTAGACGAGAATGTTACATGGACAAAGGATGATAGATGA 2319 0.4248 MDCNKDEAVRAKEIAEKKFSDREYAGAKKFALKALNLYPALEGLSQFLTTLDVYISAENKVSGEMDWYGILGVNPFDDEETVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKTKRLEYNQKRSLKGFQHNAPNHVGSQSEVPSSNGFYNFNNVTSNVRTGNSNAQARHTSAPRQQKKADTFWTICNRCRTHYEYLRIYLNHRLLCPNCNEAFLAIEKDPPPNYFKSTNWSSRQQHQSSRHHAASNNRVNQGRNCVVPQNSEGSGSSGMSSFSKTSFQWGPHSSMAGFGGMDGSSSVAAQAANVVQQASEKVRREREGAPSIAEWERSQMSKRTEGSIHKVEKPLKKRRTDDSCMNGIKGYTANHVAGAHGAANLGYVSDPRKANWETERSHGFSGTKPNSTRELSLFEIRNMLVGRAQTELRKKLEEWRSIAQSKITNKSKENKRQKGTSTDPRKPKESALNNSWHEESDSFPVTSDNAVKEDHSYMTINVPDPDFHNFDLDRAENSFGEDQVWAAYDDDDGMPRYYARIHKVISMKPFRMRISWLNSRSNSELGPIDWIGAGFTKTCGDFRTGRHEITESLNSFSHKVMWTKGTRGVIRIFPIKGEVWALYRDWSPDWNQHTPDEVIHKYDMVEVLEDFNEEEGVLVTPLIKLPDFRTVFCRHSDPDQVMRIPKEEMFRFSHQVPNYMLTGQEADNAPKGCRELDPAATPLDLLQTTTEANEGSDDVQKPKEGTLPNSPERKNASETRAEQLDENVTWTKDDR 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1545 772 PRINTS DnaJ domain signature 86 101 IPR001623 -
Dere05g1545 772 PRINTS DnaJ domain signature 68 86 IPR001623 -
Dere05g1545 772 PRINTS DnaJ domain signature 102 122 IPR001623 -
Dere05g1545 772 SUPERFAMILY Chaperone J-domain 62 157 IPR036869 -
Dere05g1545 772 Gene3D DnaJ domain 63 178 IPR036869 -
Dere05g1545 772 PANTHER BNAC03G44070D PROTEIN 1 719 - -
Dere05g1545 772 MobiDBLite consensus disorder prediction 752 772 - -
Dere05g1545 772 Pfam DnaJ domain 66 127 IPR001623 -
Dere05g1545 772 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Dere05g1545 772 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Dere05g1545 772 MobiDBLite consensus disorder prediction 160 181 - -
Dere05g1545 772 MobiDBLite consensus disorder prediction 232 283 - -
Dere05g1545 772 MobiDBLite consensus disorder prediction 444 481 - -
Dere05g1545 772 CDD DnaJ 66 119 IPR001623 -
Dere05g1545 772 MobiDBLite consensus disorder prediction 446 472 - -
Dere05g1545 772 MobiDBLite consensus disorder prediction 727 772 - -
Dere05g1545 772 Pfam Domain of unknown function (DUF3444) 496 702 IPR024593 -
Dere05g1545 772 SMART dnaj_3 65 122 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1545 Dere-ChrDere05 24981741 24984059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1545 4 228 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.047 8.96e-30 119