Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1536 ATGATATGCTGTTCCAGATTTTGGTTGTTGATCGTGGTTGTGCTCCTGCTTGCCCACAATGGGTCGTGCCACCAAGACTGCAAGGAATTAAGGTGCGGACGTCATGGGCCCCGTGTTCGGTTTCCCTTCCGACTCAAAGATAGGCAGCCCCATCACTGTGGCTATCCTGGCTTTGATCTCACTTGCACACATACTCATGATATGCTGCTTGAGCTACCCACAACTTCGGGTCCAGTAAAGCTGTTCATCAGACAGATACATTACGAATCTCGGAGACTTGAAGTATACGATCCCCAAAATTGCCTTTCGAGCCTGTTTCCAAAAATACACCACTCCTTATCACCATTCAAAATTGACTCATCCCAAACATACCCATCACATTCATCATTCGGCTTTGGGTCACCGGAAAACATTGTATTCCTCAATTGTTCTTCAGTAGGTTATCGGTACCTCAATGGTTCGCGAGGTAAAGCCGTAAAACAAGACATGTTCTCTTGCCCCATTTATGCAGCTAACTCCGGGGAATTCTTTCTTGAATCGGACCTAGTATCCTGCACCAAGATGTTCGAAATCTCATCAGATCAGCTGAACAACCTAGTACAGAATATTTTGTTTTTGGGTTGGTTGAAACCCAATTGCAGTAGATGTGAAATGTTAGGGAAAATATGTAAGCTGAAGAACAATGGCACGGAAGATGATATCGAATGTCTTGACCGTGATCCAAAGTTAACTAGATCAACTCTTATTGCTGCTGCAGGTATAACCTCAGGCTCAATTGTGCTGCTGCTGGGGCTCCTTGTACTCTTTCAATTCTATAGAATTTTTAGATTGAAAGGAGAGGATCGGGCGAGACTTGAAAAATTTTTGGACGATTATCGATCACTCAAGCCTACCAGTGCAAGTGCAATTATTCCTACAAGACGTCTGAATTTAGAGTTGGAAGTGATTCATGAATTAGAATGA 963 0.4341 MICCSRFWLLIVVVLLLAHNGSCHQDCKELRCGRHGPRVRFPFRLKDRQPHHCGYPGFDLTCTHTHDMLLELPTTSGPVKLFIRQIHYESRRLEVYDPQNCLSSLFPKIHHSLSPFKIDSSQTYPSHSSFGFGSPENIVFLNCSSVGYRYLNGSRGKAVKQDMFSCPIYAANSGEFFLESDLVSCTKMFEISSDQLNNLVQNILFLGWLKPNCSRCEMLGKICKLKNNGTEDDIECLDRDPKLTRSTLIAAAGITSGSIVLLLGLLVLFQFYRIFRLKGEDRARLEKFLDDYRSLKPTSASAIIPTRRLNLELEVIHELE 320
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1536 320 Pfam Wall-associated receptor kinase galacturonan-binding 27 97 IPR025287 GO:0030247
Dere05g1536 320 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 10 272 IPR046948 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere05g1536 Dere-ChrDere05 24890701 24892649 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1536 25 291 C3H Transcription Factor Family AT2G46495 26.298 4.07e-16 76.3