Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1534 ATGATGTGCTGTTCCAGATTTTGGTTGTTGATCTTGGTTGTGCTCCTGCTTGCCCACAATGGGTCGTGCCACCAAGACTGCAAGGAATTAAGGTGCGGACATCATGGGCCTCGTGTTCGGTTTCCCTTCCGACTCAAAGATAGGCAGCCCCATCACTGTGGCTATCCTGGCTTTGATCTCACTTGCGCACATACTCATGATATGCTGCTTGAGCTACCCACAACTTCGGGTCCAGTAAAGCTCTTCATCAAACAGATACATTACGAATCTCAGAGACTTGAAGTATACGATCCCCAAAATTGCCTTTCGAGCCTGTTTCCAAAAATCCACCACTCATTATCACCATTCAAAATTGACTCATCCCAAACATACCCATCAAATTCATCATTCGGCTTTGGGTCACCGGAAAACATTGCATTCCTCAATTGTTCTTCAGTAGGTTATCGGTACCTCAATGGTTCGCGAGGTAAAGCCGTAAAACAAGACATGTTCTCTTGCCCCATTTATGCAGCTAACTCCGGGGAATTCTTTCTTGAATCGGACCTAGTATCCTGCACCAAGATATTCGAAATCTCATCAGATCAGCTGAACAACCTAGTACAGAATATTTTGTTTTTGGGTTGGTTGAAACCCAATTGCAGTAGATGTGAGATGTTAGGGAAAATATGTAAACTGAAGAACAATGGTACGGAAGATGATATCGAATGTCTTGACCGTGATCCAAAGTTAACTAGATCAACTCTTATTGCTGCTGCAGGTATAACCTCAGGCTCAATTGTGCTGCTGCTGGGGCTCCTTGTACTCTTTCAATTCTATAGAATTTTTAGATTGAAAGGAGAGGATCGGGCGAGACTTGAAAAATTTTTGGACGATTATCGATCACTCAAGCCTACCAGGTTCTCGTATGCTGATCTTAATCGAATCACAAACCATTTTAAAGATAAATTAGGCGAAGGTGCTCATGGGGCAGTATTTAAAGGTAAGCTCTCTAATGAAATATTTGTGGCTGTGAAGATGCTTAATAACTCAGATGGGGATGGGAAAGAGTTTATAAATGAAGTGGGAATTATTGGTAAAATCCATCACGTCAATGTGGTTCGCTTATTGGGCTTCTGTGCTGATGGAGTTTACCAAGCTCTTGTTTATGATTTCTTTCCAAATGGCTCCTTACAAAATTTCATATGTTCTTCGAATGAAAATGTCTCCTTCCTTGGGTGGGAAAAGCTTCAACAAATTGCCATTGGTATAGCTAAAGGAATTGAGTATCTTCATCAAGGTTGTGATCATCAAATTCTTCATTTTGATATCAATCCTCATAATGTGTTATTGGATGACAACTTTGCTCCAAAGATTTCTGATTTTGGTTTAGCTAAATTGTTCTCTAAAAATCAAAGTATAGTGTCAATAACTGCAGCAAGAGGAACCTTAGGTTACATTGCTCCTGAAGTTTTTTCTAGAAACTTTGGGAATGTATCGTATAAATCAGATATTTACAGTTATGGAATGTTGTTGGTGGAAATGGTCGGAGGAAGGAAGAATACAAGCACAGTTGAGAAAAGTTTCCAAATTTTATACCCAGAATGGATTCATAATTTAGTTGAAGGAAGAGACATACACATCGAAATTGAAAACGAAGAAGACATTAGAATTGCAAAAAAACTAGCAATTGTGGGACTTTGGTGCATTCAGTGGCACCCAGTAGACCGCCCCTCCATTAGAACAGTGGTACAAATGTTGGAAGGGGAAGGGGACAAGTTAAAAGTGCCTCCTACTCCGCTTGATTCTTCTACTATTAAAACAAGTGCAATTGTTCCTACAAGACGTCTGAATTTAGAGTTGGAAGTGATTCATGAATTAGAATGA 1863 0.3999 MMCCSRFWLLILVVLLLAHNGSCHQDCKELRCGHHGPRVRFPFRLKDRQPHHCGYPGFDLTCAHTHDMLLELPTTSGPVKLFIKQIHYESQRLEVYDPQNCLSSLFPKIHHSLSPFKIDSSQTYPSNSSFGFGSPENIAFLNCSSVGYRYLNGSRGKAVKQDMFSCPIYAANSGEFFLESDLVSCTKIFEISSDQLNNLVQNILFLGWLKPNCSRCEMLGKICKLKNNGTEDDIECLDRDPKLTRSTLIAAAGITSGSIVLLLGLLVLFQFYRIFRLKGEDRARLEKFLDDYRSLKPTRFSYADLNRITNHFKDKLGEGAHGAVFKGKLSNEIFVAVKMLNNSDGDGKEFINEVGIIGKIHHVNVVRLLGFCADGVYQALVYDFFPNGSLQNFICSSNENVSFLGWEKLQQIAIGIAKGIEYLHQGCDHQILHFDINPHNVLLDDNFAPKISDFGLAKLFSKNQSIVSITAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLVEMVGGRKNTSTVEKSFQILYPEWIHNLVEGRDIHIEIENEEDIRIAKKLAIVGLWCIQWHPVDRPSIRTVVQMLEGEGDKLKVPPTPLDSSTIKTSAIVPTRRLNLELEVIHELE 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1534 620 Gene3D Transferase(Phosphotransferase) domain 1 385 588 - -
Dere05g1534 620 Gene3D Phosphorylase Kinase; domain 1 286 384 - -
Dere05g1534 620 PANTHER RUST RESISTANCE KINASE LR10-RELATED 284 596 IPR045874 GO:0004672
Dere05g1534 620 Pfam Protein kinase domain 312 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1534 620 SUPERFAMILY Protein kinase-like (PK-like) 292 580 IPR011009 -
Dere05g1534 620 Pfam Wall-associated receptor kinase galacturonan-binding 27 97 IPR025287 GO:0030247
Dere05g1534 620 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524
Dere05g1534 620 ProSiteProfiles Protein kinase domain profile. 310 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1534 620 FunFam serine/threonine-protein kinase PBS1-like 280 384 - -
Dere05g1534 620 FunFam PR5-like receptor kinase 385 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1534 Dere-ChrDere05 24870273 24872220 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1534 250 593 Receptor kinase-like Gene Family AT1G66910 45.028 2.95e-100 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Dere05g1534 Pkinase 7.8e-44 CL0016