Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1532 ATGTCAAACTTTTGCAAAACTTGCTTGACGATACTGCTTCTACTCACGAACCTCGGCGCGTGCCAACGAGAGTGCAGGGAACAAAGATGCGGACGTCATGGTCTGCGTATTCGATTTCCCTTCCGAATCAAAGATAGGCAACCCCATCACTGTGGCTATCCTGGCTTTGATCTCTCTTGCTCCGATAATCATGCCCTGCTTGAGCTACCCGCAGGATCGGGTCCAGTGAAGCTCTTCATCAGAGATATAGATTATGAATCTCAGATACTTGAAGTATATGACCCCCAAAGTTGCCTTCCGAGACAGTTTCTAAGACTCTACCACTCGGGAATTTCCCCTTTCAACTTTGAGCCACCATATAGAAATTTAACCTATTACAATATTTTCTTTAATTGTTCTTCAGTGGATAAATCTTGTCCCATACATGCTGCTGAGCTCTCCGACTCTTTCCTTAGCGCGGAACTACTATTCTGCACCAGGATGTTTGATATTTCCTCGAGCCTCGTTTCTTCATTCCACCTAAGGATCAATTATTTGAGTTTGACGTGGTCGACGCCGAATTGTAGTACATGTGAAGCGAAAGGAATGATATGTGGTACCGCAAGTTCAATTGTGCTGTTGCTGTTGCTACTAGCATTATTTCAAATCTACAGGTATCTTAGAACTAAAGAAGAGGATCAGGTGAGAGTTGAAAATTTTTTGGAAGACTACAAGGCACTTAAACTTACCAGATTCTCTTATGCTGATCTTAAGCGAATTACAAATCATTTCAAGGATAAGATAGGTGAAGGAGCTCATGGAACAGTCTTTAAAGGCAAGCTATCTAGCGAAATTCCAGTGGCTGTGAAGATCCTCAATGACACAGAGGGAGATGGCAAAGAATTCATTAATGAAGTGGGAACGATGGGCAAAATTCACCATGTTAATGTGGTTCGCTTATTGGGCTTTTGTGCTGAAGGATTTTATCGAGCTCTTATCTATAATTTCTTTCCATACGGCTCGCTACAAAACTTCGTATCATCTCCAGATAACAAAGAAGTATTCCTTGGGTGGGAAAAGCTACAGCTAATTGCTATTGGCATAGCTAAAGGAATCGAGTATCTTCACCAAGATTGTGATCATCGAATTCTTCACTTTGATATCAATCCTCGCAATGTATTGTTGGATCAAAACTTTGTTCCTAAAATTTCTGATTTTGGTCTAGCCAAATTATGCTCTAAAAGTAGAAGTATTGTGTCAATGACGACAGCTAGAGGGACTATAGGCTACATTGCACCCGAAGTTTTCTCCAGAAACTTTGGAAATGTCTCATACAAATCAGACATTTATAGTTATGGTATGTTGCTGCTAGAAATGGTGGGAGGAAGAAAAGATACAAACACAACTCAAGATAGTTTTCAAATTCTATATCCTGAATGGATCCATAAATTGGTTGAAGGAAGAGACATAATTAACATCCATATAGAGGATGATGAAGATATTAGAATCGCAAAGAAATTGGCAATTGTGGGACTTTGGTGCATTCAATGGCATCCAGTGAACCGTCCATCCATTAAAGCAGTTATTCAAATGCTAGAAGGAGAAGGTGACAAATTAAAGGTGCCTCCTTCTCCTTTTGAATCCACTGCTTCTACTTCTACTAACACAAGTGCAATTATTCCGCTGAGATGTTTGAATTTAGAGTTGGAAGTAATTCATGAGGATTCATAG 1710 0.4006 MSNFCKTCLTILLLLTNLGACQRECREQRCGRHGLRIRFPFRIKDRQPHHCGYPGFDLSCSDNHALLELPAGSGPVKLFIRDIDYESQILEVYDPQSCLPRQFLRLYHSGISPFNFEPPYRNLTYYNIFFNCSSVDKSCPIHAAELSDSFLSAELLFCTRMFDISSSLVSSFHLRINYLSLTWSTPNCSTCEAKGMICGTASSIVLLLLLLALFQIYRYLRTKEEDQVRVENFLEDYKALKLTRFSYADLKRITNHFKDKIGEGAHGTVFKGKLSSEIPVAVKILNDTEGDGKEFINEVGTMGKIHHVNVVRLLGFCAEGFYRALIYNFFPYGSLQNFVSSPDNKEVFLGWEKLQLIAIGIAKGIEYLHQDCDHRILHFDINPRNVLLDQNFVPKISDFGLAKLCSKSRSIVSMTTARGTIGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKDTNTTQDSFQILYPEWIHKLVEGRDIINIHIEDDEDIRIAKKLAIVGLWCIQWHPVNRPSIKAVIQMLEGEGDKLKVPPSPFESTASTSTNTSAIIPLRCLNLELEVIHEDS 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1532 569 Pfam Wall-associated receptor kinase galacturonan-binding 25 94 IPR025287 GO:0030247
Dere05g1532 569 Gene3D Phosphorylase Kinase; domain 1 228 329 - -
Dere05g1532 569 PANTHER RUST RESISTANCE KINASE LR10-RELATED 227 544 IPR045874 GO:0004672
Dere05g1532 569 ProSitePatterns Protein kinases ATP-binding region signature. 261 283 IPR017441 GO:0005524
Dere05g1532 569 Gene3D Transferase(Phosphotransferase) domain 1 331 534 - -
Dere05g1532 569 SUPERFAMILY Protein kinase-like (PK-like) 239 526 IPR011009 -
Dere05g1532 569 FunFam serine/threonine-protein kinase PBS1-like 222 329 - -
Dere05g1532 569 Pfam Protein tyrosine and serine/threonine kinase 257 524 IPR001245 GO:0004672|GO:0006468
Dere05g1532 569 ProSiteProfiles Protein kinase domain profile. 255 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1532 569 FunFam PR5-like receptor kinase 330 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1532 Dere-ChrDere05 24850238 24852110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1532 196 539 Receptor kinase-like Gene Family AT5G38280 47.009 8.29e-102 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Dere05g1532 PK_Tyr_Ser-Thr 4.8e-44 CL0016