Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1523 ATGCCGCTTTGGCGCCTACTTTTACTGTACTGTGTTGCACATTCTGATAACTGTGAATTCTTGAAGGGTGTGTGTCTTATTGGAGAAATGTATGCAGAGTCTGGTCTCCTGTTCCCGTATTTCCAGAATTTCTCTCAAGAACTTCAACAACTCGAGGAATACTGCAAAACCCACAAGTCCAATGATCTAATGAGTGACCTTGTCGACTCTTCTGCCATATCAGAATTTGATTTGGCAGTTGAGGGGGATCTGTTTAAGGCTCCTGAACCTATTATTGAAGAACCAGTCATAGACCTGGATCCCATGGCAGCAGCCATCTCAATAATATCTTGTGGGGAAGATGTTGTCTCCTCACAGGGACTAAAATCTACTGATATCAATGCTCTTCAAAGTGAGCAGCTTCTAAGTGAAGTATTCTATGAGTGCAAAAAGGACCTCTTGGAGAAGGCTGCAATAGAATCACCACTCTCTGAGATTCTGGATATCAAGGTTCCTGTACTGAATACAGATGAAAATAAAATTCAAGAAAACAAACTAATTCCAGACATGCTATTACCGAAAAGTGTCAGTTCAGGATGTTTGAGTTCAATGGATTGGATGCAAGGAGCTGCAATCAAGCCTGCTTTTCTTGAATTCCCAGGAATAGATTTCAATGAAGTTTATGGCATGCGGAGGGCGTTTAGTGAAGGAGATATAAAGGCTCTTGGTAATGGCAATGTGAGCCTCATCCAATCTCCTCGTGATAGGCCCTTTCCTATCAGCAACTGCACCAGTGAGGAACGCCAAGAAAAGCTCTCCAGATACAGGAATAAGAAGACAAAGAGAAACTTTGGCAGGAAAATCAAGTATGCTTGTCGGAAGGCTCTGGCTGACAGTCAACCGAGAATCCGTGGACGATTTGCAAAAACTGAAGAATCTGATGTCAAGAGGCTATAA 936 0.4252 MPLWRLLLLYCVAHSDNCEFLKGVCLIGEMYAESGLLFPYFQNFSQELQQLEEYCKTHKSNDLMSDLVDSSAISEFDLAVEGDLFKAPEPIIEEPVIDLDPMAAAISIISCGEDVVSSQGLKSTDINALQSEQLLSEVFYECKKDLLEKAAIESPLSEILDIKVPVLNTDENKIQENKLIPDMLLPKSVSSGCLSSMDWMQGAAIKPAFLEFPGIDFNEVYGMRRAFSEGDIKALGNGNVSLIQSPRDRPFPISNCTSEERQEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEESDVKRL 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1523 311 ProSiteProfiles CCT domain profile. 261 303 IPR010402 GO:0005515
Dere05g1523 311 Coils Coil 41 61 - -
Dere05g1523 311 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 196 304 IPR045281 GO:0009909
Dere05g1523 311 Pfam CCT motif 261 303 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1523 Dere-ChrDere05 24759432 24764411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1523 257 307 C2C2-CO-like Transcription Factor Family AT5G57660 49.020 6.13e-10 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dere05g1523 CCT 2e-17 CL0281