Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1508 ATGGACGAACCCGATGAACAGTTCCAGAGGTGGAATAGAACTTCGAGTACCGGCTGGAGGTGCAGTGGAAGGGCAATGAGTGGAAGATCGTCGTGTAAGAAACTCTACCCCTACAACCTACAGTCTAATATGAAGAGGAAACGACCCGAAATTGAAGATAATTCTGAAAGTGAGCTTGTGGGTCCTGCTGGAGATGGAGTTCCAGAAAATGGTGCTTCGAATGTCGTTGAGGAAATTACAAGCCTTTTTGGTGAAGTACAAGGGAAGGGAGTGAACTCTGACGGTGAAAGTATGGATATTGGTTATCCTGGAGAGGGTAAGTGGAGACAAGTTCAGATGGGTGAAGTTGTGGATCAAATTCTTGGCCGTAGAGTAGAATTTCAAGCTGGGTATGATGAGGGTGGGAATCAGCATGCCGGTCTCGATCGCCGTGGTGTTGCTTATCAGCCATGGAGCGTAGAACGTGTTGGTGGAAATGGCGTTGGTGTTGCTGATGTTGGCCAAGAAGAGCATGGGAATGGGAGTGGCGCAGGTGTTTGTGAAAATGACACTCTGGATCTTCCTGCTGTATCTGAAGATAAAAATTTTGGTTGCTTAAAGGTGCATGAGTCAAGAGGCAAGCGTGGTCGGCCCAAACGATCAAAGAAGGATAGAGTTCTCGTTGTTGAAGACGGAAAAGAACTGTTAAATGCCGCTAGTAACGAGGAGGGAGGTGAAGCCTTGAGGCTATGTTTTACAAGAGGTCAGCCAAAGTGTTCCAAGATTAAGAGTAAACAGCTTATTGGAGTAAACGATATGAACATGAATGGACAAATTGTTAATAGAGATAACCGTGCGGATACAAATGGGATAACTTGTCTGCAAGTTGTTCGACGTGAAAGTTCAACAAGCATTGACGAGAGACAAAAGTTGCTGCCTGTTAAGATTGTTGCTAGCGACGAAGATGGAGGCAAAATTGCAAGACTGAAGAATCATTGTCAACCAAGAGATCTGAAAAATAAAAAACGTGGTAGACCAAATGGTTCAAAAAATAAAATCAAGAGTACTATGTGTGCTATTGATGCCTGTGCAGGTGACATTGAAACACCAACAAAGCGTGGTAGACCGAAGGGCTCCAAAAATAAAAGGAAGATCGTTTTGTGTGTTAGGGATGCAAGTTCTGGTAATATTGAAACACCAAAGAAGCGTGGCAGACCGAAGGGCTCCAAAAATAAAAGGAACATTGTTTTGTGTGTTAGCGATGCAGGTTCAGGTGATATTGAAACACCAAAGAAGCGTGGTAGGCCAAAGGGTTCAAAAAATAAAATGAAGAGTATTGTGTGTCCAAGTAATGATGGTGCAGCTGACATTGAAACACTGAACAAGCAAGGTCAACAAAAGGGTGCGAAAATCGAAGAGGGGAGTATTGTGTGTGCTAGTAGTGCAGGTGCAGTTGATATTGAAACACCAAAGAAGCGTGGTAGACCAAAGGGTTCAAAAAATAAAATGAAGAGTATTGTGTGTGCAAGTAATGAAGGTGCAAGTGACATTGGAACACCCAAAAAGCGTGGTAGACCAAAGGGCTCGAAAAATAAAAAGGAGAGTATCGTGTGCACTTGTAATGCAGGCGCCGGTGACATGGGAAGACCAAAAATTGAGGTTGATTCTAGAAGGAAAAGGGAGCTGAGGAGTTTAATATGCCACCAGTGCTGGAGGAATGATAGGAGTGGTGTTGTCATTTGTGCCAATTGCAAACGGAAGCGATACTGTTATGAGTGCATAGCAAAATGGTACCCAGAGAAAACGAGAGAGGACATAGAGTTTGCTTGTCCCTTTTGTCTTGGTAATTGCAATTGCCGGCTGTGTTTGAAGGAGTATACTGGGAATGTTGAACCAGATACAGATATCAATTTGCAAAAGTTGCTTTACTTGCTTAAGAAAATTCTGCCTTTACTCCAGCATATTCATCAAGAGCAGAGATCAGAAATGGAATTAGAATCTAGCTTGCTTGGTTGGCAACTCATGGAAGAAGATATTATACAGTCACAAATTGATGATGATGATCGAGTGTATTGTGACAACTGCTATACATCCATTGTCAATTTCCACAGAAGTTGTCCTGATCCTAATTGTAGTTATGATCTCTGTCTCACTTGTTGCATGGAACTAAGAAATGAAGTTCATTTTGGAAATATTCCTACTAATGACAATAAGGGAGAGGCTGATGTCTCATCTGACTTTTCCTGGAAAGCAGAGATAAATGGTAGCATTCCTTGCCCTCCAAAATCAAGGGGCGGTTGTGGCACTACAATTCTCTCATTGAGGCGCTTTTTTGAAGCCAATTGGGTTGACAAACTTATTGGGAATGCAGAGGAACTTACCATCAAATATCAGCCCCCTAATGTTGATTTCAGCAAAGGTTGTCTATTGTGCCATAATTTTGGGATAGATGGAGTACAGGATTCTGTAAAGCAGGCTGCTTCCAGAGAAAACTGTCATGATAATTTTTTGTTCTGCCCAAATGCTATGCACATTGGAGACACAGAATTCAAGCATTTCCAGATGCATTGGATAAGCGGTGAACCTGTTATAGTTAGGAACACGTTTGAAAGTGCTAGTGGCCTCAGCTGGGATCCGATGGTGATGTGGAGGGCTTTCAGGGGGGCAAAGAGGATACTAAAAGAGGAAGCAACTATGGTCAAAGCCATTGACTGCTTGGATTGGTGCGAGGTTGAAATTAATATCTTACAGTTCTTCAAGGGCTACAGTGAAGGTCGTAGGTATAGAAATGGATGGCCAGAGATGTTGAAGTTAAAAGATTGGCCTCCATCAAATGCTTTCGAACACTGTTTGCCTAGGCATGGTGCTGAGTTTATAGCTATGCTTCCATTTAGTGACTATACTCATCCCAACTCTGGCATTCTAAATCTTGCTACAATGCTACCTGTTGTTTTAAAGCCAGATTTGGGCCCCAAAACATATATTGCTTATGGATCTTTAGAAGAGCTTGGTAGAGGTGATTCTGTAACAAAATTGCATTGTGACATCTCAGATGCGGTCAACATACTCACTCACGCAGCTGAAGTAAAGAGACCACCTCGGCAAAGCAAAACCATAAATAAATTACGGGAAAAGCATGAAGCTGAAGATATGTGTGAGCTCTATGGCTGGAAGAATGAAGCATTGGGTGCAAGTGGAAGAAAGACAAATCAGCATTGCCTAGATATTAGCATGGGTCCTAAAAGCCCTGAAAAAGAAGACAGTCTTGTGAGAGACTCTACTATACTTATAAGTCAAGGAACAGAGGAAGTGAATATGAACGAACAGCAAAATAGATCCATGGATTTGGCGCCCTCAGGAGCATATATATCAGCTTGTGCTCCAAAATGCTCAGCTTCTCCCAAAAGTAAAGTAAGTGCTTTTGGGCAGTCAGTTTACAATTTGAATACATGGGTTCAACGTCTTGATTTTAGTAGTCATAATACTTGTTCTTCATCTCAGGGACAAGACTGTGAATGGACACATTGTGAAGTTAAGAATGCAGTCCGGAAACGCCCATCATCACATGATGGACCTTGTAAAGGAATTTCATTACCTGAACATATGCTGTCTAGAACATTCACAAAATACAATGAAAAAGAAAAAACTTTTGCTATGCATGAAAATTATAGGCCTTGCTTCATCGAAGATCAACCTGATACAAACACCTTCTACATTGATTACAACTCATGCACTCTTCCAGTCTGGGTAAATCAGGAACATCCAACAAATTGTACAGTACAATCTGAATCAAAAAACTGGTGCATGTATGCTGAGGAATTACCTAATGGGATAAGTAGCAAAATTAAGCACGATTGTGACAGTTCCTGTGCTGGTAAGAATGTTTCTGATTTCATCTTCCCTAGGGAGCAAAATTCAGCCATTCAACGTCCTTCTGTTTGTGGAAATGTGGGTGACAGTTACACTAATAGCTCTTTGAAAGAGGGGACTAGTACTAGTTGTGACTCTACTCTTCACAAGTCTTATGAGCAAGGTGTTATAACGGATATTGAAAGACATTTTAATAGTCGAGAATGTAATCAGCCTTCTTTTGGAACAGAAGAACCAAAATTATACAGCAGGTTCAACTCTTCAGGGGCATGTTCAGAAATTAAGGCTGACAGAATAGAGTCAATTAAAAATGATATGAGAACAACAAAAGATATCCTTGAAAATGACGATGGGTCAGAGACTGAACATGGGAGTGCTGTATGGGACATATTCCGTAGGCACGATGTACCAAAGCTGATGGAGTACCTCAAGAAACACCACAGAGAATTCCGCCACATAAATAATCATCCAGTGAATTCTGTGCTTCATGTAACTAGGGATTCCTCTTCAGGCATAGAACCATGGACATTTGAGCAACACCTTGGAGAGGCTGTTTTCATACCTGCTGGGTGCCCGCATCAATCTTGCATAAAAGTGGCTTTGGACTTTGTTTCACCTGAAAACCTACATGAATGCATTCGATTGACAGAGGAGTTTCGGCTGCTTCCAAAGAACCATAGATCTAAGGAAGATAAACTTGAGATAAAGAAGATGGCGCTATATGCTGCCGATGTTGCTATATCTAAGGCCACTAAATTAATGGGAAGGAAATGA 4623 0.4166 MDEPDEQFQRWNRTSSTGWRCSGRAMSGRSSCKKLYPYNLQSNMKRKRPEIEDNSESELVGPAGDGVPENGASNVVEEITSLFGEVQGKGVNSDGESMDIGYPGEGKWRQVQMGEVVDQILGRRVEFQAGYDEGGNQHAGLDRRGVAYQPWSVERVGGNGVGVADVGQEEHGNGSGAGVCENDTLDLPAVSEDKNFGCLKVHESRGKRGRPKRSKKDRVLVVEDGKELLNAASNEEGGEALRLCFTRGQPKCSKIKSKQLIGVNDMNMNGQIVNRDNRADTNGITCLQVVRRESSTSIDERQKLLPVKIVASDEDGGKIARLKNHCQPRDLKNKKRGRPNGSKNKIKSTMCAIDACAGDIETPTKRGRPKGSKNKRKIVLCVRDASSGNIETPKKRGRPKGSKNKRNIVLCVSDAGSGDIETPKKRGRPKGSKNKMKSIVCPSNDGAADIETLNKQGQQKGAKIEEGSIVCASSAGAVDIETPKKRGRPKGSKNKMKSIVCASNEGASDIGTPKKRGRPKGSKNKKESIVCTCNAGAGDMGRPKIEVDSRRKRELRSLICHQCWRNDRSGVVICANCKRKRYCYECIAKWYPEKTREDIEFACPFCLGNCNCRLCLKEYTGNVEPDTDINLQKLLYLLKKILPLLQHIHQEQRSEMELESSLLGWQLMEEDIIQSQIDDDDRVYCDNCYTSIVNFHRSCPDPNCSYDLCLTCCMELRNEVHFGNIPTNDNKGEADVSSDFSWKAEINGSIPCPPKSRGGCGTTILSLRRFFEANWVDKLIGNAEELTIKYQPPNVDFSKGCLLCHNFGIDGVQDSVKQAASRENCHDNFLFCPNAMHIGDTEFKHFQMHWISGEPVIVRNTFESASGLSWDPMVMWRAFRGAKRILKEEATMVKAIDCLDWCEVEINILQFFKGYSEGRRYRNGWPEMLKLKDWPPSNAFEHCLPRHGAEFIAMLPFSDYTHPNSGILNLATMLPVVLKPDLGPKTYIAYGSLEELGRGDSVTKLHCDISDAVNILTHAAEVKRPPRQSKTINKLREKHEAEDMCELYGWKNEALGASGRKTNQHCLDISMGPKSPEKEDSLVRDSTILISQGTEEVNMNEQQNRSMDLAPSGAYISACAPKCSASPKSKVSAFGQSVYNLNTWVQRLDFSSHNTCSSSQGQDCEWTHCEVKNAVRKRPSSHDGPCKGISLPEHMLSRTFTKYNEKEKTFAMHENYRPCFIEDQPDTNTFYIDYNSCTLPVWVNQEHPTNCTVQSESKNWCMYAEELPNGISSKIKHDCDSSCAGKNVSDFIFPREQNSAIQRPSVCGNVGDSYTNSSLKEGTSTSCDSTLHKSYEQGVITDIERHFNSRECNQPSFGTEEPKLYSRFNSSGACSEIKADRIESIKNDMRTTKDILENDDGSETEHGSAVWDIFRRHDVPKLMEYLKKHHREFRHINNHPVNSVLHVTRDSSSGIEPWTFEQHLGEAVFIPAGCPHQSCIKVALDFVSPENLHECIRLTEEFRLLPKNHRSKEDKLEIKKMALYAADVAISKATKLMGRK 1540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1508 1540 MobiDBLite consensus disorder prediction 324 346 - -
Dere05g1508 1540 MobiDBLite consensus disorder prediction 505 527 - -
Dere05g1508 1540 ProSiteProfiles JmjC domain profile. 963 1503 IPR003347 -
Dere05g1508 1540 MobiDBLite consensus disorder prediction 384 443 - -
Dere05g1508 1540 MobiDBLite consensus disorder prediction 10 24 - -
Dere05g1508 1540 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 557 618 IPR018866 -
Dere05g1508 1540 SUPERFAMILY Clavaminate synthase-like 1406 1529 - -
Dere05g1508 1540 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 330 1537 IPR045109 GO:0032454|GO:0033169
Dere05g1508 1540 ProSiteProfiles Zinc finger RING-type profile. 560 606 IPR001841 -
Dere05g1508 1540 SMART cupin_9 944 1503 IPR003347 -
Dere05g1508 1540 Gene3D Cupin 1360 1512 - -
Dere05g1508 1540 Gene3D Cupin 825 1080 - -
Dere05g1508 1540 ProSiteProfiles WRC domain profile. 5 49 IPR014977 -
Dere05g1508 1540 SMART AT_hook_2 423 435 IPR017956 GO:0003677
Dere05g1508 1540 SMART AT_hook_2 513 525 IPR017956 GO:0003677
Dere05g1508 1540 SMART AT_hook_2 363 375 IPR017956 GO:0003677
Dere05g1508 1540 SMART AT_hook_2 333 345 IPR017956 GO:0003677
Dere05g1508 1540 SMART AT_hook_2 483 495 IPR017956 GO:0003677
Dere05g1508 1540 SMART AT_hook_2 205 217 IPR017956 GO:0003677
Dere05g1508 1540 SMART AT_hook_2 393 405 IPR017956 GO:0003677
Dere05g1508 1540 MobiDBLite consensus disorder prediction 1 30 - -
Dere05g1508 1540 SUPERFAMILY Clavaminate synthase-like 841 1048 - -
Dere05g1508 1540 Pfam JmjC domain, hydroxylase 1407 1478 IPR003347 -
Dere05g1508 1540 MobiDBLite consensus disorder prediction 43 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1508 Dere-ChrDere05 24539234 24548498 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Dere05g1508 JmjC 3.2e-08 CL0029