Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1505 ATGGGGAGCAGGTTAATGGAGTTGAAAACAGAGCCACTAGTGGAGGAGAAGAAAAGAACAGAAGCCGATCTAGGAGTCCTACAAAGCACTTTCAGGGACCCTCCAATAGAGCACCGTGTTCATAAAGGCAAAGGCAAAGCCGATCTTTCCGTCGGAGATGGGGAAGAAAGGTGGAGGCAGCTGGTTCTCGTCGGTGAAGAAAGCTTTCAAGTCTTCTTCAAAGAACTCGCCGGCGCCGGAGAGGAAGGTGATCAATTCCCCTGTTCTTGTCTTGATAATGAAGAGAAAAGGAAGCATGAAGCGCCAGAGGTGGTGTCTTTGGAGCATTTTGCTGCAGAGAGTTCTCCTGATGATATTACCAATGAGGAGAGTACCACATCGACGCCTGTGACTGATGATAGAAATCACGCTGTCGCCGTCGCGGCAGCAACTGCTGCAGCTACCGAAGCGGCGGTCGCAGCCGCTCAGGCAGCGGCGAGAGTCGTTCGGCTGGCAGGTTATGGACGCCAATCCCAGGAAGAAAGAGCAGCGACACTCATTCAATCATACTATAGAGGCTACCTAGCTCGACGTGCCCGGCGTGCTTTGAAGGGATTAGTGAGACTGCAAGCGCTTGCGAGAGGTCACAATGTGAGGAAGCAAGCGCAGATGACAATGCGGTGTATGCAAGCGTTGGTGAGAGTACAGGCAAGAGTTAGAGCTCGCAGACTCCAATTGAGCCATGACAAGCTCTACAAAAACGTGGAGGAACATGATTTAAAGTCCATGAGCCCCTTATACGAGGATGGTTGGGACAATAGGCGTCACAGTTTTCAGAAAATCAAGGAAAATGACTTGAGGAAACATGAAGCTGTGATGAAGCGGGAGAGAGCTCTTGCTTACGCTTTTAACTATCAGCAACAGCAGAAGCAGCTTCTACATTCGGATCCAAATATTGGTGAAGAAATGGGAATATATGGCAATGAGCTTGAAAGGTCCAAGAGAGATTGGAACTGGCTAGAGCGTTGGATGTCTTCTCAACAACAAGAAGTTAGGCACATGGGGCCGCCTGAGACCTCTTACATGACCCTTGCCACTACAACAACTACCACCACTACTACAGATGACATGTCTGAGAAGACGGTAGAAATGGACATTGTTGCACCTCCAAACTCGAGCAACGTCATCAGGGGCCAAACGGGTCAAGGCTTTCTTCTTGATTCAAGCCCAATTTCCAATAGGCCACAAGACCAGCCCCAACCCAATGCAAGTGTACCTAGCTATATGGCCCCAACCAAGTGTGCAAAGGCCAAGGTACGAGGTCAAGGCCCACTCAAGCCACGTGGCTCTTCGGTGCCTCAGTGGAATTCATCAACAAGGAAGAGCTCAGTTATTGGGCCGGGCTGTGACTCCTCCAGCACAGTCGGAGGAACAGCAAATTACCAGTATATGAGGAGTCCAAGCCCGAAAATTACTGGGGTTCAGCCACAGTCTAGACGGATCGCAGGTGGAAGCCAAGATTATATTGGCGCTCAGGATTGGGCCCTGCCTCTTGGAGCCCATGGTTGGGCATGA 1554 0.5051 MGSRLMELKTEPLVEEKKRTEADLGVLQSTFRDPPIEHRVHKGKGKADLSVGDGEERWRQLVLVGEESFQVFFKELAGAGEEGDQFPCSCLDNEEKRKHEAPEVVSLEHFAAESSPDDITNEESTTSTPVTDDRNHAVAVAAATAAATEAAVAAAQAAARVVRLAGYGRQSQEERAATLIQSYYRGYLARRARRALKGLVRLQALARGHNVRKQAQMTMRCMQALVRVQARVRARRLQLSHDKLYKNVEEHDLKSMSPLYEDGWDNRRHSFQKIKENDLRKHEAVMKRERALAYAFNYQQQQKQLLHSDPNIGEEMGIYGNELERSKRDWNWLERWMSSQQQEVRHMGPPETSYMTLATTTTTTTTTDDMSEKTVEMDIVAPPNSSNVIRGQTGQGFLLDSSPISNRPQDQPQPNASVPSYMAPTKCAKAKVRGQGPLKPRGSSVPQWNSSTRKSSVIGPGCDSSSTVGGTANYQYMRSPSPKITGVQPQSRRIAGGSQDYIGAQDWALPLGAHGWA 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1505 517 Gene3D - 171 225 - -
Dere05g1505 517 MobiDBLite consensus disorder prediction 394 418 - -
Dere05g1505 517 PANTHER IQ-DOMAIN 5-RELATED 106 454 - -
Dere05g1505 517 MobiDBLite consensus disorder prediction 432 470 - -
Dere05g1505 517 MobiDBLite consensus disorder prediction 442 470 - -
Dere05g1505 517 Pfam Protein of unknown function (DUF4005) 405 469 IPR025064 -
Dere05g1505 517 MobiDBLite consensus disorder prediction 113 132 - -
Dere05g1505 517 Pfam IQ calmodulin-binding motif 174 191 IPR000048 GO:0005515
Dere05g1505 517 ProSiteProfiles IQ motif profile. 173 201 IPR000048 GO:0005515
Dere05g1505 517 SMART iq_5 172 193 IPR000048 GO:0005515
Dere05g1505 517 SMART iq_5 194 216 IPR000048 GO:0005515
Dere05g1505 517 MobiDBLite consensus disorder prediction 117 132 - -
Dere05g1505 517 ProSiteProfiles IQ motif profile. 197 224 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1505 Dere-ChrDere05 24454946 24462718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1505 96 483 IQD Protein Family AT3G49260 51.208 2.05e-92 288