Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1454 ATGATCGATTCAAAGGGAAAACTGAAGCCATCAAAATTAGATGAATCAGATTCTAAATTCACCAAAAATATTGTGGAAAAAGATGTGCCATCTGGAAAGCGGGTGAGATGTAAAGAAGAGAAAAATATTGAATGGTGGCTCAGCTTCATCTACATATCTATTGTGATGTGCGTGGGGTCCACCGCCTCCATGTGTACCCTCAGTCAAGGGCAGTTTCGGTATTTGGGGTCCACCTCTTTCTTTTCTTCTGGTACCACGCAAAGGGTTTCTATGGGGATGGCTGGTGCAGATAATAATAATAATAGTCATAATAATCATAATCAGAGTCAGAATCTGAAGCACCATCTGATAAACTTCCATTTTCATATTCATCTTCCTCACATTCATTTTCCCCACCATGAGAAGAAGGAGGGAGATCTGAAGGACATCCCCAAAGGGTGTCTGGCAATATTGGTGGGTCAAGGAGAAGAGCAACAGAGGTTTGTGGTTCCTGTGATTTACATCAACCACCCGCTCTTCATGCAGCTGCTGAAGCAAGCTGAAGAAGAATATGGGTTCGATCAGAAAGGCCCTATCACAATCCCCTGCCATGTGGAACAGTTCCGCACCGTCCAAGGCATTATCGACAGGGAAGAAAAGTCGCACCATCATCATCATCAGCACCATCACAATCACCACCATCATCACACTTGAATGCGGTGCAGAGAGGATAATGGCGAAAGGTTGAATCCCAAATTTGTATGTATTCTCGAAGAGGACATAGATGGGAATCGGAGGGTCCATGTAGACAAAGTTATGGTCACTGTGTTTTCTGCTGTTGTGCCGTTGCTTTCTGTGTTTTCTAATCTAATTGAACCAGTCTCATCCATCCTTCCTGGCCAATTCCAATTTGGGTTTGAGCCTTTAATGTGTGATGAAACAATGTTTGACTTGCAAACTCGTAGGCACTCTTGCGTTTCTCTCTCAATCCTTCTTCCTGAAGGAGAAGGGGCCACCATCACCATGCAATTATTAGTTGGTTTTGACTACAATAGAAACGTATTTAATCTTCACACGAAATCCCTTACAAGAAGCCATGTGCGATCTGTGCTTACATGTAAAATTGAAGGACAATTTTACTTTGCACGCAAATTACATGCTAAGGAATAA 1149 0.4265 MIDSKGKLKPSKLDESDSKFTKNIVEKDVPSGKRVRCKEEKNIEWWLSFIYISIVMCVGSTASMCTLSQGQFRYLGSTSFFSSGTTQRVSMGMAGADNNNNSHNNHNQSQNLKHHLINFHFHIHLPHIHFPHHEKKEGDLKDIPKGCLAILVGQGEEQQRFVVPVIYINHPLFMQLLKQAEEEYGFDQKGPITIPCHVEQFRTVQGIIDREEKSHHHHHQHHHNHHHHHTXMRCREDNGERLNPKFVCILEEDIDGNRRVHVDKVMVTVFSAVVPLLSVFSNLIEPVSSILPGQFQFGFEPLMCDETMFDLQTRRHSCVSLSILLPEGEGATITMQLLVGFDYNRNVFNLHTKSLTRSHVRSVLTCKIEGQFYFARKLHAKE 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1454 382 MobiDBLite consensus disorder prediction 215 230 - -
Dere05g1454 382 MobiDBLite consensus disorder prediction 211 235 - -
Dere05g1454 382 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 133 203 IPR003676 GO:0009733
Dere05g1454 382 Pfam Auxin responsive protein 138 204 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1454 Dere-ChrDere05 23954557 23961308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1454 142 202 Calmodulin-binding Proteins AT5G20810 55.738 9.54e-17 76.3