Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1449 ATGATGATGAAGATGGTGCATCATAATCATCACCGCCGTCCGATATCGCCCTTTGATAACGATTCCTGTGCTGGGGGTGGTGATGGCGATGGTCCCACGACTTCTATGTCTATGTCTCATCATCATAATATAAACGACTTTGTTAGTGGAGGTTCTGCTTCTCCTGCTGTTGCTGCTCTTCATAGTGGGGGTGCTGCTGTAAGAACTTTGCAGCCTTTTGATATTCCCACTCGCCCTGCCTTCAAATCCCCAGGGGAGATGGCGGCTTCGCTGGGGTTCCCTTTCACAAATGCACAATGGATGGAGCTTGAAAGGCAAGCTATGGTTTACAAGTACATGATGGCTTCTGTTCCTGTTCCTGCTCACCTCCTTATACCCACCCCATTCACGCCTGCCTCTCGCTCCCCCTTGGATAGTGGTTTCAATCTGAGGTTGTCAAGTAGCAGTACTGATCCAGAGCCAGGGAGGTGCAGGAGAACTGATGGGAAAAAATGGAGATGTTCTAGAGATGTGGCTCCAAACCACAAGTACTGCGAGCGTCATATGCACAGAGGTCGTCCCCGTTCAAGAAAGCCTGTGGAAGTTCAAGCCAACAGCAGCAGCACCACCACCAACAATCAGCAAAACAAAAGGGCTCGCCAAGATTATCAGCATCCTTTTGCTACATCTCCAGTTACGGTGGCTGTTTCCAATGCCACAATCACAAATGGTGGATCTTCTTCTCAGTATCTTCCGTCTACTACCAGTCAGCCATATCACGAGTCTTCCCTTTCTCTTGATAAATATGGTGTCAAACATGCTAATTTTGAATCTCTGGCTTCTGTGCCATCGGATAGCCAACCCAGGGGCTTGGACTGGATGCTGAAGGGTGACCCCATATCCATGGCTGCTTCTGATCCTGAATGGCAGACTCTGATGCAGAACAAAGTTGGGTTGACCAACCAGGGTTCCTGCAACAGCGCCTCCATCTCAAGTCCAAATTACGACGATACTCTGTATCTGAATTCCTATGCGTCTTTCAACTCAGGACTAGAGCAACAGAACAGACGCTGCCCTCTGTTCCTCAATCCTCTCATAGTTCCTGTGGAAAATCCCGAGTCCCAAAAACCCAGGGGTTTCATTGACGCTTGGTCTAATACAGAAACAGGAGAAAACAACAATGCCAACGCCAACAAGAGCCCCGTTTCGTCTAATGGTAAATTATCCCTCTCTTCTCTTGATCTATCAATGGGTGGTGGTGGTTCTGTGGTGGATGAAGAAATGGGTACTTCCCAAATGGGTTTATGCCTCATGGAGCCTGATCGAAACACAGAATATAGCACAAAAACCCATCTTGCTTGTTGGCTTACCCCACCTGCACCATGGGTGGGTTCAACTCCTGGGGGTCCCTTGGCTGAGGTTCTAAGGCCAAGCGCGGTGGCTGCCCTCAACGACGCGGCCTCCGATCCCTCGTCTCCGGTGGTAACAAATGCCGAATCTGGAAGCCCACTGGGAACAATGGTGTCATCTCCATCTGGGGTTTTGCATAAGACACTTGCTACGTTATCTGACAGTAGTAGCAATAGCAGCCCAACGGTGGCATCTTCAAGGGCCAATTCCGAGATTGCCTTGCTCTTGTTTAATAAAGCAAAATTAGCATCTCCTAATTGA 1650 0.4903 MMMKMVHHNHHRRPISPFDNDSCAGGGDGDGPTTSMSMSHHHNINDFVSGGSASPAVAALHSGGAAVRTLQPFDIPTRPAFKSPGEMAASLGFPFTNAQWMELERQAMVYKYMMASVPVPAHLLIPTPFTPASRSPLDSGFNLRLSSSSTDPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVEVQANSSSTTTNNQQNKRARQDYQHPFATSPVTVAVSNATITNGGSSSQYLPSTTSQPYHESSLSLDKYGVKHANFESLASVPSDSQPRGLDWMLKGDPISMAASDPEWQTLMQNKVGLTNQGSCNSASISSPNYDDTLYLNSYASFNSGLEQQNRRCPLFLNPLIVPVENPESQKPRGFIDAWSNTETGENNNANANKSPVSSNGKLSLSSLDLSMGGGGSVVDEEMGTSQMGLCLMEPDRNTEYSTKTHLACWLTPPAPWVGSTPGGPLAEVLRPSAVAALNDAASDPSSPVVTNAESGSPLGTMVSSPSGVLHKTLATLSDSSSNSSPTVASSRANSEIALLLFNKAKLASPN 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1449 549 PANTHER GROWTH-REGULATING FACTOR 5 62 404 IPR031137 GO:0005634|GO:0006351|GO:0032502
Dere05g1449 549 MobiDBLite consensus disorder prediction 482 497 - -
Dere05g1449 549 ProSiteProfiles WRC domain profile. 151 195 IPR014977 -
Dere05g1449 549 Pfam WRC 152 194 IPR014977 -
Dere05g1449 549 ProSiteProfiles QLQ domain profile. 94 129 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dere05g1449 549 MobiDBLite consensus disorder prediction 1 41 - -
Dere05g1449 549 MobiDBLite consensus disorder prediction 178 213 - -
Dere05g1449 549 Pfam QLQ 94 126 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dere05g1449 549 MobiDBLite consensus disorder prediction 370 404 - -
Dere05g1449 549 MobiDBLite consensus disorder prediction 373 404 - -
Dere05g1449 549 MobiDBLite consensus disorder prediction 140 161 - -
Dere05g1449 549 MobiDBLite consensus disorder prediction 193 213 - -
Dere05g1449 549 SMART QLQ_2 93 129 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dere05g1449 549 MobiDBLite consensus disorder prediction 478 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1449 Dere-ChrDere05 23890791 23893407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1449 62 468 GRF Transcription Factor Family AT4G24150 32.110 2.34e-39 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Dere05g1449 WRC 5.9e-21 No_clan