Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1448 ATGAATAACCTTCATGGGACCATACCACAGGAGATTTTTAGGCTTTCTGGCTTAACCACCTTGTCCTTTTCGGGGAATACCCAACATAGGTCCATCCCTTCGAAAGTGAGCTCCATGGAGCAACTTCAGTACATTGATGTGTCTAACAATGTTATGACAGGATATATTCCCAAAGAAATAGATGGCTGCGCAAGCTTGCTGTCGCTTGTATTAGCAAGAAACCACTTTAACGGTTCAATCCCAAGCACTCTGGGGAATTTAAAATCGTTGGAAACATTGGATTTATCTTCAAACAATCTCTCTGGTTCCATCCCTGCAACTTTGGAAAAGCTCCAGCATATGATGAAGTTGAATTTGTCTTTCAACCATTTGGAAGGGGAAGTTCCTATGAAAGCATGGGTGAAATTTGGCCGAAAGAAGAAAAATAAGGGAGAGAAAACGAGTCTGTCAACTTCTCCTCTCAAAGGAGTGCCTCAAAATATATCCTTTTCTGATATTCGAGCTGCCACAAACAATTTTGCATCTGAAAACTTGATAGGAACGGTAGTCCATTGCGATCTGAAACCTGGTAATGTCTTATTAGATGAAAATTTGGTTGCACATGTTGGGGATTTTGGATTAGCAAGGCTTCTTTCTCAGAATTCATTGGAGTCTACCACTCTGGCACTGAAGGGTACCATTGGCTACATTCCCCCAGGGTTGCCAACTGATGAGATGTTCAAGGATAGTTTAAGCCTTAACATGTTTGCTTCGGCCATAAATGAGAACCAAATACTGATGGTAGCTGATCCCAAGCTTTTCAACGATTCTGAATGGTGGACACAAGGCTCAAGCACCGGTTATCCTAGTGATTGCATGAGTGGTGACAGACATAGCCATAGTTTCACAATACCCAGCGCAGGGCAGAGGAGGGGCAACGATCTGTGTTGTAAGCAAGAACATGCTATTACACTGTGTAACTTGAAACGATCTATTGCTTATTTTGGCGCAGCAGTACATATTTTTCATGGGGAAGGCAGGAGCAAGCTCTTGGTTGACTGCAGTGAAAAGGGCTTTCAGTGTAATAACTGTGAATCAAATGGAATTACATCTTTTGTGTCTATGTATATAATGCAGAAGAGGGGAAAACGAAGATGGATTTTCAGGAAGCCGTTTAGTCAAGAAATAGTTGGTACTCAGATTTGCGAAGAAAGAACTATAACCACCGTTGCTGATGTTATAACAACAACAAATAATAATGTGTCTGAGGTAGTTGATGCTGATCAGCAAAGACACGCCATTGCAGTAGCCATGGCAACCACAGCAGCTGCTACGGCAGCAGTAGCATCTGCTCAAGCAGCCCTGGAGGTCGTTCGGCTTGCAAGGCCTTCCATCTTTGTTAAACACCATTATGCTGCCACTATTATTCAAACAGCCTTCAGAGGTTATCTGGCGAGAAGAGCGCTTCGGGCACTTAAAGGGTTAGTGAAGCTGCAGGCATTAGTGAGAGGTCAAAGTATCCGCAAAAGAGCAAAATTTACTCTTCAATGCATGCAAGCTCTTGTTCGAGTTCAGACTCGGCTATGTGAACAGCGAGCTAAGAGTATTTCCCATGAAGGAAGCTCATGTTCCAGACAAAGTGATGATCCCTCTAATTTATGGGGGTCACATTTGGCAGATAGCAACTCCATTTCTAGAGACGATGAAACACAAACAGTAAATAAGATTCGAGCTGTTCTAAAGAAAACGAAGGAAGATGCCTTGAAACGAGAAGAGGCCCTAGCTGATGCTTTCTCTCACCAGATATGGAGAACTAGAGGGGACAGCGTCAGTGAAGGAGAGGTTGAGGACGATTCTAGATGGTCTGATGAATGGAGAAGAAGAAGAAGAAGCTTGTACAGAGAGAGCACCGGTAGAGCTTCGTGTGATCAAAGAGACCCTATCAAGATATTAAATACTCCACTAAGAACCCACACACTTCCTTTGTCTTCACCTGTGGATAAAGCCCACAGTGAGGTCTCTTTCCAGCCTCCATTAGTGACACCATCACCAACAAAGACGAAGCATCTTCAGGTGCATTCAGCTAGTCCTCGTTGCACAAAGTCCATATATTCATTGCATCAGATAAACAGCATAAGCAGCAGCCACACCCATGGTAAAGGAGCAAGTTATGGTTCAAGGCCCACTTCAATGCCTAACTATATGGCAGCCACTGCATCTGCGAAGGCTCGGCTTCGGTCACAGAGTGCACCCAGGCAGAGAACTTCAACCCCACAGAAGTAG 2262 0.4394 MNNLHGTIPQEIFRLSGLTTLSFSGNTQHRSIPSKVSSMEQLQYIDVSNNVMTGYIPKEIDGCASLLSLVLARNHFNGSIPSTLGNLKSLETLDLSSNNLSGSIPATLEKLQHMMKLNLSFNHLEGEVPMKAWVKFGRKKKNKGEKTSLSTSPLKGVPQNISFSDIRAATNNFASENLIGTVVHCDLKPGNVLLDENLVAHVGDFGLARLLSQNSLESTTLALKGTIGYIPPGLPTDEMFKDSLSLNMFASAINENQILMVADPKLFNDSEWWTQGSSTGYPSDCMSGDRHSHSFTIPSAGQRRGNDLCCKQEHAITLCNLKRSIAYFGAAVHIFHGEGRSKLLVDCSEKGFQCNNCESNGITSFVSMYIMQKRGKRRWIFRKPFSQEIVGTQICEERTITTVADVITTTNNNVSEVVDADQQRHAIAVAMATTAAATAAVASAQAALEVVRLARPSIFVKHHYAATIIQTAFRGYLARRALRALKGLVKLQALVRGQSIRKRAKFTLQCMQALVRVQTRLCEQRAKSISHEGSSCSRQSDDPSNLWGSHLADSNSISRDDETQTVNKIRAVLKKTKEDALKREEALADAFSHQIWRTRGDSVSEGEVEDDSRWSDEWRRRRRSLYRESTGRASCDQRDPIKILNTPLRTHTLPLSSPVDKAHSEVSFQPPLVTPSPTKTKHLQVHSASPRCTKSIYSLHQINSISSSHTHGKGASYGSRPTSMPNYMAATASAKARLRSQSAPRQRTSTPQK 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1448 753 ProSiteProfiles Protein kinase domain profile. 1 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1448 753 ProSitePatterns Serine/Threonine protein kinases active-site signature. 182 194 IPR008271 GO:0004672|GO:0006468
Dere05g1448 753 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 33 148 - -
Dere05g1448 753 SMART iq_5 484 505 IPR000048 GO:0005515
Dere05g1448 753 SMART iq_5 461 483 IPR000048 GO:0005515
Dere05g1448 753 MobiDBLite consensus disorder prediction 532 560 - -
Dere05g1448 753 Pfam Protein kinase domain 182 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1448 753 ProSiteProfiles IQ motif profile. 486 513 IPR000048 GO:0005515
Dere05g1448 753 SUPERFAMILY Protein kinase-like (PK-like) 182 237 IPR011009 -
Dere05g1448 753 Gene3D Transferase(Phosphotransferase) domain 1 178 249 - -
Dere05g1448 753 Pfam Leucine rich repeat 66 124 IPR001611 GO:0005515
Dere05g1448 753 Pfam Protein of unknown function (DUF4005) 690 753 IPR025064 -
Dere05g1448 753 PANTHER IQ-DOMAIN 5-RELATED 376 747 - -
Dere05g1448 753 ProSiteProfiles IQ motif profile. 462 490 IPR000048 GO:0005515
Dere05g1448 753 Gene3D - 460 516 - -
Dere05g1448 753 ProSiteProfiles Leucine-rich repeat profile. 89 112 IPR001611 GO:0005515
Dere05g1448 753 MobiDBLite consensus disorder prediction 704 753 - -
Dere05g1448 753 Pfam IQ calmodulin-binding motif 465 483 IPR000048 GO:0005515
Dere05g1448 753 Gene3D Ribonuclease Inhibitor 1 177 IPR032675 -
Dere05g1448 753 SUPERFAMILY L domain-like 2 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1448 Dere-ChrDere05 23883419 23888243 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1448 377 753 IQD Protein Family AT4G00820 37.089 1.81e-62 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Dere05g1448 DUF4005 2.2e-12 No_clan