Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1447 ATGACATTACACATTCATTTTACCTTCCTCCTTCTGTTCTTCCAACTTCACTTTCATGGCATCCTCTGTGATAACGGAGATGCCCTTCTTTCATTCAAATCCCAAGTCACCGACCCAAAGAATTCTCTCTCTACCTGGACCTCCAATTCCTCTATCTGCACCTGGTATGGGGTCTCCTGCTCCACGAACACAACCAGAGTACAATATCTTAGTCTACGAGGACTAGGCCTTTCTGGTAAACTACCCTCTTCCCTCTCCAACCTCACTTATTTACAGTCACTTGACCTTTCCAATAATGCATTCCAAGGCCATCTTCCGTTCGAGTTTTCAAATCTTTCTCTCCTTAAGGTCATCAATTTAGCTTATAACAATCTCAGCGGTTCACTTCCTCCACAGTTATCCCTTCTCCACCACCTGCAAGTTCTGGACTTCTCTGTCAATAATCTCACCGGTCAAATCCCTCCTGAATTTGGAAAATTTTCCTCTCTCAATAATCTTTCCTTGGCTAGAAACCATCTTTCTGGGGAAATTCCCAGTGAGTTGGGAAATCTTCGTAACCTTTCTTATCTTCGACTGTCTGAGAATAATTTCTCTGGGGATTTTCCCGTTTCCATCTTCAACATCTCTTCGTTAGTCTTCTTATCTACAACACAAAATCGCCTAACAGGAAAATTACCACAAGATATTGGCCATTCTCTTCCAAATATCCGGAGTCTCTATCTGGCAAATAATAGCTTTGCGGGTGTGATTCCAAGTTCTATATCCAATGCTTCACGTCTGGAATTCCTCGATCTCTCTCGCAATGAATTTCATGGATTTATTCCTCTGTTCAGCAACATGAACAATCTCACCAACCTAGTTCTCGGTGTTAACTCTCTCTCTTCCACAACATTACATAATTCTAAGTTCTTCGATTCCCTTAGAAACAGTACAAAGCTGAAAATTGTTATGATCCATTCTAATCAGCTAGCAGGAGAGCTTCCAAGGTCAGTAGCAAATCTTTCAACCACTCTAGAACACTTTTGTGTATCCATGAACTCGTTCACTGGAAGCATCCCTCAGGGTATGGGAAAATATCTAAACCTTGTGTCCTTGTCTTTTGAAATGAATCATTTCATTGGGGAGATACCAAGAGACATAGGAGCACTGAATAAGCTGGTGCAACTTCTGATGTCCAACAACGGATTGTCTCGAGACATTCCGAACACGTTTGGGAATTTGACACAATTATCTAACCTTGATATGGGGTTTAACCAGCTCTCTGGCAGAATTCCCTCTAGCATTACACAGTGCAAAAGATTGAACTATTTGTACCTTGAAACGAATAATCTTCATGGGACTATACCAGCGGAGATTTTTAGGCTTTCTGGCTTAATCGCCTTGTCCTTGGCAGGGAATACCCTGCATGGGTCCATCCCTTCTGAAGTGAGCTCCATGGAGCAACTTCAGTTCATGGACATGTCTAACAATCTTATGACAGGATATATTCCTGAGGAAATAGATGGTTGCGCTAGCTTGCAGATGCTTGCATTAGCAAGAAACAACTTCAGTGGTTTAATCCCAAGTACTTTGGGGAATTTAACATCGTTGGAAACATTGGATTTATCTTCAAACAATCTCTCTGGTTCCATCCCTGCAACTTTGGAAAAGCTCCAGTATATGATGAAGTTGAATTTGTCTTTCAACCATTTGGAAGGGGAAGTTCCTATGAAAGGTGTTTTTACAAACTTGACCGCGGTTGCCCTCCAAGGAAACAACAAGCTCTGTAGTCCTAACAAGGAAAATGCTGAAAAATTAAGAATCTTTCTGTGTGTCAAAGGGAAAAAGAACACAGCATTCTTACTCCCTCTCATACTTGCTGTTATAGTGGCCTCTATTCTTTTCCTTTCCATTTTCTGCTTAGCATGGGTGAAATTTGGCCGAAAGAAGAAAAATAAGGGAGAGAAAACGAGTCTGTCAACTTCCCCTCTCAAGGGAATGCCTCAAAATATATCCTTTTCTGATATTCGAGCTGCCACAAACAATTTTGCATCTGAAAACTTGATAGGAACGGGTGGGTTTGGCTTTGTTTATAAGGGTGTGTTCAGAATCAGTCAATGTGAAACTACCCTTGCGGTGAAGGTCCTCGACTTGAAACAAAGCAAAGCCTCTCGGAGTTTCAATGCAGAGTGTGAAGCTCTGAAGAATGTTAGGCATAGGAATCTCGTGAAGCTTATCACCTCTTGCTCTAGCATTGATTATAAAGGAGATGATTTTAAGGCCCTGGTTATGCAATTCATGGCCAACGGTAATTTGGACACGTGGCTGTACCCCGTTGATGAAGAAGAATCAGGGTCCTCCCTGACATTCTTGCAAAGACTGAATATTGCTGTGGACGTTGCTAGTGCTATGGACTATTTGCACCATGACTGTAACCCACCAGTAGTCCATTGCGATCTGAAACCTGGTAATGTCTTATTAGATGAAAATATGGTTGCACATGTTGGGGATTTTGGATTAGCAAGGCTTCTTTCTCAGAATTCAATGGAGTCTACCACTCTGGCACTGAAGGGTACCATTGGCTACATTCCCCCAGAATATGGTATTGGAGGCAGAGCTTCGACGTCTGGAGATGTGTACAGTTTTGGGATTTTACTGCTTGAGATGTTCATGGGGAAGAAGCCAACTGATGAGATTTTCAAGGAAGGTTTAAGCCTTAACAAGTTTGCCTCGGCCATTAATGAGAATCAAATACTAAAGGTAGCTGATCCAAAGCTGTTTAACGATTCTGAAAGGTCGACACAAAGCTCAAGCACTGGTTATCCTAGTGAAGGCAAAAGTAGTGACAGCTATCACTGTAGTTTCACATTGAGCTTGCGCAGGGCAGAGGAAGGTATAGCTGCTGTGATTAGAGTTGGGTTGTCTTGTGCTGCTGAAGCGGCCAAAGATCGCTTGACCATGAGAGAAGCCTCAACAAAATTGCAAGGAATTAGGCAGTCTATGCTGGCTTTATGA 2994 0.4225 MTLHIHFTFLLLFFQLHFHGILCDNGDALLSFKSQVTDPKNSLSTWTSNSSICTWYGVSCSTNTTRVQYLSLRGLGLSGKLPSSLSNLTYLQSLDLSNNAFQGHLPFEFSNLSLLKVINLAYNNLSGSLPPQLSLLHHLQVLDFSVNNLTGQIPPEFGKFSSLNNLSLARNHLSGEIPSELGNLRNLSYLRLSENNFSGDFPVSIFNISSLVFLSTTQNRLTGKLPQDIGHSLPNIRSLYLANNSFAGVIPSSISNASRLEFLDLSRNEFHGFIPLFSNMNNLTNLVLGVNSLSSTTLHNSKFFDSLRNSTKLKIVMIHSNQLAGELPRSVANLSTTLEHFCVSMNSFTGSIPQGMGKYLNLVSLSFEMNHFIGEIPRDIGALNKLVQLLMSNNGLSRDIPNTFGNLTQLSNLDMGFNQLSGRIPSSITQCKRLNYLYLETNNLHGTIPAEIFRLSGLIALSLAGNTLHGSIPSEVSSMEQLQFMDMSNNLMTGYIPEEIDGCASLQMLALARNNFSGLIPSTLGNLTSLETLDLSSNNLSGSIPATLEKLQYMMKLNLSFNHLEGEVPMKGVFTNLTAVALQGNNKLCSPNKENAEKLRIFLCVKGKKNTAFLLPLILAVIVASILFLSIFCLAWVKFGRKKKNKGEKTSLSTSPLKGMPQNISFSDIRAATNNFASENLIGTGGFGFVYKGVFRISQCETTLAVKVLDLKQSKASRSFNAECEALKNVRHRNLVKLITSCSSIDYKGDDFKALVMQFMANGNLDTWLYPVDEEESGSSLTFLQRLNIAVDVASAMDYLHHDCNPPVVHCDLKPGNVLLDENMVAHVGDFGLARLLSQNSMESTTLALKGTIGYIPPEYGIGGRASTSGDVYSFGILLLEMFMGKKPTDEIFKEGLSLNKFASAINENQILKVADPKLFNDSERSTQSSSTGYPSEGKSSDSYHCSFTLSLRRAEEGIAAVIRVGLSCAAEAAKDRLTMREASTKLQGIRQSMLAL 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1447 997 Pfam Leucine rich repeat 505 564 IPR001611 GO:0005515
Dere05g1447 997 Gene3D Ribonuclease Inhibitor 277 599 IPR032675 -
Dere05g1447 997 PRINTS Leucine-rich repeat signature 91 104 - -
Dere05g1447 997 PRINTS Leucine-rich repeat signature 527 540 - -
Dere05g1447 997 SUPERFAMILY Protein kinase-like (PK-like) 653 983 IPR011009 -
Dere05g1447 997 ProSiteProfiles Leucine-rich repeat profile. 529 552 IPR001611 GO:0005515
Dere05g1447 997 FunFam LRR receptor-like serine/threonine-protein kinase EFR 304 609 - -
Dere05g1447 997 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 760 997 - -
Dere05g1447 997 Pfam Leucine rich repeat N-terminal domain 26 61 IPR013210 -
Dere05g1447 997 Gene3D Ribonuclease Inhibitor 24 176 IPR032675 -
Dere05g1447 997 SMART serkin_6 676 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1447 997 ProSitePatterns Protein kinases ATP-binding region signature. 682 707 IPR017441 GO:0005524
Dere05g1447 997 ProSiteProfiles Protein kinase domain profile. 676 997 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1447 997 Pfam Protein tyrosine and serine/threonine kinase 679 894 IPR001245 GO:0004672|GO:0006468
Dere05g1447 997 FunFam LRR receptor-like serine/threonine-protein kinase EFR 647 759 - -
Dere05g1447 997 SUPERFAMILY RNI-like 70 443 - -
Dere05g1447 997 SMART LRR_typ_2 136 159 IPR003591 -
Dere05g1447 997 SMART LRR_typ_2 383 406 IPR003591 -
Dere05g1447 997 SMART LRR_typ_2 527 551 IPR003591 -
Dere05g1447 997 SMART LRR_typ_2 88 111 IPR003591 -
Dere05g1447 997 SMART LRR_typ_2 455 479 IPR003591 -
Dere05g1447 997 SMART LRR_typ_2 233 257 IPR003591 -
Dere05g1447 997 SMART LRR_typ_2 184 208 IPR003591 -
Dere05g1447 997 SMART LRR_typ_2 407 431 IPR003591 -
Dere05g1447 997 Gene3D Ribonuclease Inhibitor 177 276 IPR032675 -
Dere05g1447 997 SUPERFAMILY L domain-like 370 592 - -
Dere05g1447 997 PANTHER OS04G0122200 PROTEIN 182 991 - -
Dere05g1447 997 ProSitePatterns Serine/Threonine protein kinases active-site signature. 808 820 IPR008271 GO:0004672|GO:0006468
Dere05g1447 997 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 59 303 - -
Dere05g1447 997 MobiDBLite consensus disorder prediction 922 943 - -
Dere05g1447 997 Gene3D Transferase(Phosphotransferase) domain 1 760 995 - -
Dere05g1447 997 Gene3D Phosphorylase Kinase; domain 1 657 759 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1447 Dere-ChrDere05 23868914 23871996 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1447 16 992 Receptor kinase-like Gene Family AT3G47570 39.746 0.0 687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Dere05g1447 PK_Tyr_Ser-Thr 2.1e-39 CL0016