Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1443 ATGGAGCAACTTCAGTACATTGACGTGTCTAACAATGTTATGACAGGATATATTCCCAAAGAAATAGATGGCTACGCAAGCTTGCTGTTGCTTGTATTAGCAAGAAACCACTTCAATGGTTCAATCCCAAGCACTCTGGGGAATTTAAAATTGTTAGAGTCATTGGATATATCATCAAACAACCTCTCTGGTTCCATCCCTGCAACTTTGGAAAAGCTCCAATATATAGAGAAGTTGAATTTGTCTTTCAACCATTTGGAAGGAGAAGTTCTTATTAAAGGTGTTTTTACAAACTTTACCGGGGTTGCCCTTCAAGGAAACAACAAGCTATGTAGTCCTAACAAGGAAAATGCTGAAAAATTAAGAATCTTTCTGTGTGTCAAAGGGAAAAAGAACACAACATTCTTACTCCCTCTCATACTTGTTGTTATAGTGGCCTCTATTCTTTTCTTTTTCATTTTCTGCTTAGCATGGGTGAAATTTGGCCGAAAGAAGAAAAATAAGGGAGAGAAAATAAGTCTGTCAACTTCTCCTCTCAAGGGAATGCCTCGAAATATATCCTTTTCTGATATTCGAGCTACCACAAACAATTTTGCATATGAAAACTTGATAGGAAATAGTAGGTTCAGCTTTGTTTATAAGGATGTGTTCAAAATCAATCAATGTGAAATTAACTATGTGGTGAAGGTCCTCAACTTGAAACAAAGCAAAGCCTCTCAGAGTTTCAATTCAGAGTGTGAAACTTTGAAGAATGTTAGGCATAAGAACCTTGTGAAGCTTATCACCTCTTGCTCTAGCATTGATTATAAAGGAGATGATTTTAAGGCCTTAGTTATGCAATTCATGGCCAATGGTAATTTGGACACATGGCTATACCCCATTGATGAAGAAGAATAA 897 0.3657 MEQLQYIDVSNNVMTGYIPKEIDGYASLLLLVLARNHFNGSIPSTLGNLKLLESLDISSNNLSGSIPATLEKLQYIEKLNLSFNHLEGEVLIKGVFTNFTGVALQGNNKLCSPNKENAEKLRIFLCVKGKKNTTFLLPLILVVIVASILFFFIFCLAWVKFGRKKKNKGEKISLSTSPLKGMPRNISFSDIRATTNNFAYENLIGNSRFSFVYKDVFKINQCEINYVVKVLNLKQSKASQSFNSECETLKNVRHKNLVKLITSCSSIDYKGDDFKALVMQFMANGNLDTWLYPIDEEE 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1443 298 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 1 119 - -
Dere05g1443 298 Gene3D Phosphorylase Kinase; domain 1 179 281 - -
Dere05g1443 298 SUPERFAMILY L domain-like 2 113 - -
Dere05g1443 298 PRINTS Leucine-rich repeat signature 52 65 - -
Dere05g1443 298 PRINTS Leucine-rich repeat signature 73 86 - -
Dere05g1443 298 ProSiteProfiles Protein kinase domain profile. 198 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1443 298 Pfam Protein tyrosine and serine/threonine kinase 201 291 IPR001245 GO:0004672|GO:0006468
Dere05g1443 298 Pfam Leucine Rich Repeat 52 73 IPR001611 GO:0005515
Dere05g1443 298 PANTHER OS04G0122200 PROTEIN 1 291 - -
Dere05g1443 298 Gene3D Ribonuclease Inhibitor 1 120 IPR032675 -
Dere05g1443 298 SUPERFAMILY Protein kinase-like (PK-like) 181 293 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1443 Dere-ChrDere05 23780800 23781696 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1443 1 90 Receptor kinase-like Gene Family AT3G47570 40.000 1.51e-12 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Dere05g1443 PK_Tyr_Ser-Thr 8.9e-10 CL0016