Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1435 ATGACATTACACATCAATCTCACCATCTTCCTTCTGTTCTTCCAACTTCACTTTCATGGCATCCTCTGTGATAACAGAGATGCCCTTCTTTCATTCAAATCGCAAGTCACCGACCCAAAGAATTCTCTCTCTACCTGGACCTCCAATTCCTCCATCTGCACCTGGTATGGGGTCTCCTGCTCCACAAACACAACCAGAGTACAATCTCTTAGTCTACGAGGACTACGCCTTTCTGGTAAACTACCCTCTTCCCTCTCCAACCTCACTTATTTACAGTCGCTTGACCTTTCCAATAATGCATTCCAAGGCCATCTTCTGTTCGAGTTTTCAAATCTTTCTCTCCTTAAGGTCATCAATTTAGCTACTAACAATCTCAGCGGTTCACTTCCTCCACAGTTATCCTTTCTGCACCAGCTGCAAGTTCTGGACTTCTCGGTCAATAATCTCACCGGTCAAATCCCTCCTGAATTTGGAAATTTTTCCTCTCTCAATAATCTTTCCTTGGCTAGAAACCATCTTTCTGGGGAAATTCCCAGTGAGTTGGGAAATCTTCGTAACCTTTCTTATCTTCAACTGTCTGAGAATTATTTCTCTGGGGATTTTCCCGTTTCCATCTTCAACATCTCTTCTTCTATATCCAATGCATCACATCTGGAATTCCTAGATCTCTCTCGCAATGAATTTCATGGATTTATTCCTCTGTTCAGCAACATGAACAATCTCACCATGCTATTTCTCAGTGATAACTCTCTCTCTTCCACAACATTACATAATTCTAAGTTCTTCGATTCCCTTAGAAACAGTACAAAACTGAAAATTGTGATGATCCAGTCTAATCAGCTAGCAGGAGAGCTTCCAAGGTCAGTAGCAAATCTTTCAACCACCCTAGAACAGTTTTGTGTATCCATGAACTCGTTCACTGGAAGCATCCCTCAGGGTATGGGAAAATATCAAAACCTCGTGTCCTTATCTTTTGAAATGAATCATTTCATTGGGGAGATACCAAGAGACATAGGAGCACTGAATAAGCTGGGGCGACTTCTGATGTTCAAAAACAGGTTGTCTGGAGATATTCCGGACGTGTTTGGGAATTTGACACAATTATATATCCTTGCAATGGGGTTTAACCAGCTCTCTGGCAGAATTCCCTCTAGCATTGCACAGTGCAAAAGATTGAACTATTTGAATCTTGAAACGAATAATCTTCATGGGACTATACCAGTGGAGATTTTTAGGCTTTCTGGCTTAACCACCTTGTCCTTTGCAGGGAATACCCTGCATGGGTCCATCCCTTCTGAAGTGAGCTCCATGGAGCAACTTCAGTACATTGACGTGTCTAACAATTTTATGACAGGATATATTCCCGAAGAAATAGATGGCTGCGCAAGCTTGCTGTCGCTTGTATTAGCAAGAAACCACTTTAATGGTTCAATCCCAAGCACCCTGGGGAATTTAAAATCCTTGAAAACATTGGATTTATCTTCAAACAACCTCTCTGGTTCCATCCCTGCAACTTTGGAAAAGCTCCAGGATATGATGAAGTTGAATTTGTCTTTCAACCATTTGGAAGGGGAAGTTCCTTTGAAAGGTGTTTTCACGAACCTTACCCGAGTTGCTCTCCAAGGAAACAACAAGCTCTGTAGTCCTAACAAGGAAATTGCAGAAAAATTGAGTATCTTTGTGTGTGTCCAAGATAAGAAGAACACAACATTTTTACTCCCTCTCATACTTGCAGCTACAGGGGCCTCCATTCTATTCATTTCCACTATCTGCTTTATATGGGTGAAATTTGGCCGAAAGAAGAAAAACAAAGGGGAGAAAACGAATGAAAGTATGGTTGCACACGTTGGGGATTTTGGATTAGCAAGGCTTCTTTCTCAGAATTCATTGGAGTCTACCACTCTGGCACTGAAGGGTACCATTGGCTACATTCCCCCAGAATATGGTATTGGAGGCAGAGCTTCGACGTCTGGAGATGTGTACAGTTTTGGGATTTTACTGCTTGAGATGTTCATGGGGAAGAAGCCAACTGATGAGATTTTCAAGGAAGGTTTAAGCCTTAACAAGTTTGCCTCGGCCATTAATGAGAATCAAATACTGAAGGTAGCTGATCCAAAGCTGTTTAACGATTCTGAAAAGTCGACACAAAGCTCAAGCACTGGTTATCCTAGTGAAGGCAAAAGTAGTGACAGCTATCACTGTAGTTTCACATTGAGCTTGCGCAAGGCAGAGGAAGGTATAGCTGCTGTGATTAGAGTTGGGTTGTCTTGTGCTGCTGAAGTGGCCAAAGATCGCTTGACCATGAGAGAGGCCTCAACAAAATTGCAAGGAATTAGGCAGTCTATGCTGGCTTTATGA 2358 0.422 MTLHINLTIFLLFFQLHFHGILCDNRDALLSFKSQVTDPKNSLSTWTSNSSICTWYGVSCSTNTTRVQSLSLRGLRLSGKLPSSLSNLTYLQSLDLSNNAFQGHLLFEFSNLSLLKVINLATNNLSGSLPPQLSFLHQLQVLDFSVNNLTGQIPPEFGNFSSLNNLSLARNHLSGEIPSELGNLRNLSYLQLSENYFSGDFPVSIFNISSSISNASHLEFLDLSRNEFHGFIPLFSNMNNLTMLFLSDNSLSSTTLHNSKFFDSLRNSTKLKIVMIQSNQLAGELPRSVANLSTTLEQFCVSMNSFTGSIPQGMGKYQNLVSLSFEMNHFIGEIPRDIGALNKLGRLLMFKNRLSGDIPDVFGNLTQLYILAMGFNQLSGRIPSSIAQCKRLNYLNLETNNLHGTIPVEIFRLSGLTTLSFAGNTLHGSIPSEVSSMEQLQYIDVSNNFMTGYIPEEIDGCASLLSLVLARNHFNGSIPSTLGNLKSLKTLDLSSNNLSGSIPATLEKLQDMMKLNLSFNHLEGEVPLKGVFTNLTRVALQGNNKLCSPNKEIAEKLSIFVCVQDKKNTTFLLPLILAATGASILFISTICFIWVKFGRKKKNKGEKTNESMVAHVGDFGLARLLSQNSLESTTLALKGTIGYIPPEYGIGGRASTSGDVYSFGILLLEMFMGKKPTDEIFKEGLSLNKFASAINENQILKVADPKLFNDSEKSTQSSSTGYPSEGKSSDSYHCSFTLSLRKAEEGIAAVIRVGLSCAAEVAKDRLTMREASTKLQGIRQSMLAL 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1435 785 SUPERFAMILY Protein kinase-like (PK-like) 609 777 IPR011009 -
Dere05g1435 785 SUPERFAMILY L domain-like 22 254 - -
Dere05g1435 785 SMART LRR_typ_2 485 509 IPR003591 -
Dere05g1435 785 SMART LRR_typ_2 160 184 IPR003591 -
Dere05g1435 785 SMART LRR_typ_2 136 159 IPR003591 -
Dere05g1435 785 SMART LRR_typ_2 365 389 IPR003591 -
Dere05g1435 785 SMART LRR_typ_2 413 437 IPR003591 -
Dere05g1435 785 SMART LRR_typ_2 238 264 IPR003591 -
Dere05g1435 785 FunFam LRR receptor-like serine/threonine-protein kinase EFR 257 568 - -
Dere05g1435 785 Gene3D Ribonuclease Inhibitor 137 208 IPR032675 -
Dere05g1435 785 MobiDBLite consensus disorder prediction 710 731 - -
Dere05g1435 785 Pfam Leucine rich repeat N-terminal domain 26 61 IPR013210 -
Dere05g1435 785 Gene3D Transferase(Phosphotransferase) domain 1 607 783 - -
Dere05g1435 785 Gene3D Ribonuclease Inhibitor 24 136 IPR032675 -
Dere05g1435 785 Pfam Leucine rich repeat 464 522 IPR001611 GO:0005515
Dere05g1435 785 ProSiteProfiles Protein kinase domain profile. 453 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1435 785 FunFam Leucine-rich repeat receptor-like protein kinase 23 179 - -
Dere05g1435 785 PRINTS Leucine-rich repeat signature 485 498 - -
Dere05g1435 785 PRINTS Leucine-rich repeat signature 91 104 - -
Dere05g1435 785 Gene3D Ribonuclease Inhibitor 209 556 IPR032675 -
Dere05g1435 785 Pfam Protein tyrosine and serine/threonine kinase 610 682 IPR001245 GO:0004672|GO:0006468
Dere05g1435 785 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 611 777 - -
Dere05g1435 785 SUPERFAMILY L domain-like 296 550 - -
Dere05g1435 785 ProSiteProfiles Leucine-rich repeat profile. 487 510 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1435 Dere-ChrDere05 23611839 23614921 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1435 609 779 Receptor kinase-like Gene Family AT5G20480 38.068 9.00e-26 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Dere05g1435 PK_Tyr_Ser-Thr 2.5e-10 CL0016