Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1432 ATGAACATGAAGCATATTCATCTCCCATTGCTCCTTTGTTTCTTCCTACTCCTTCATCTTCATGGCATCCTCTGTAAGAAGGAAGCAAGTCTTAACAAAGACACCGACAAAGATGCTCTCTTATCATTCAAATCCGTCATCTCCGACCCAAACAAAGCTCTCTCTGACTGGTCGTCAACTTCAGATTCCTCTCACTGCAACTGGCATGGTGTATCCTGCTCCAAAGTTGGAAGCAGAGTCCAATCCCTTAGCCTGCCAGGACTTGGCCTCTCTGGGAAACTCCCCTCTTCTCTCTCCAACCTCTCTTATCTGCACTTGCTTGATCTCTCCAACAACTCATTTCACGGCCAAATTCCCCCACAGTTTAGCCGCCTTTCACTCCTCAATATGCTCTCGTTAGCTTTCAACAACCTCAGTGGAACGCTTCCACCACAATTGGGCCTTCTTCACCGGCTCCAATTTCTGGACTTGTCTATCAACAGTCTCACTGGTCCACTCCCTCGACATTTCGGAAACCTCTCCTCTCTTACTGGTCTTTTCTTAGCAAGGAACCATCTTCTTGGAAAAATTCCAAGTGAATTGGGTAATCTTTGTAATCTTTCTCATCTTCACCTCTTTGATAACTATTTCTCTGGGGATTTTCCTTTTCGTATTTTCAACATTTATTCGCTAGTCTTCTTGTCTGTAACAAGCAATCACCTTTCGGGGAAGTTACCACAGGATATTGGTCATTCTCTTTCAAACCTCAAGGGCCTCTTTCTAGCAAACAATAGGTTCGGAGGAGAGATTTCTAGCTCCATATCCAATGCTTCGCAGCTCCATGATCTCGATCTGTCCAACAATGAGTTTCATGGGTGGGTTCCTCTGTTCAATAACATGAACGAACTTACCTATCTGAATCTGGGCCGAAACCATTTCTCATCGACGTCACTGCGCAATTCTCAGCTCTTCGGTTCCCTAGGAAACTCCACGCAATTGCAATTTCTCAAACTCCATAACAATCGGTTAGCTGGAGAACTTCCAAGCTCTGCTGCGAATCTGTCGAGCAATCTCCAACATTTTTGTGTTGCTGGCAATTCGTTGAGCGGCAGAATCCCTCTGGGGATGGGGAAATTTCGAAACCTAGAGTTCTTGACTTTAGAAAGTAATTTTTTCACTGGAGAGATACCCACGGACATCGGAGCACTGCACAAACTGGTGCAACTCGTAGCATACCACAATAGGCTGTCCGGAGAAATTCCAAATATTTTAGGCAATTTTACCCAACTAAGTATATTTGACCTGGGTTATAATCAGTTTGCGGGTAATGCCCTACACGGTCCATTTCCTTCCGAAGTCAACTCTTTGCAGCAGCTTCAGTTTATGGACATTTCAGACAACCAGTTGTCAGGATTTATTCCTAAAGAAATCGGAGGGGAAGTTCCCATGAAAGGTGTTTTTACCAACTCTAGCCAGGTTGCTGTCCAAGGAAACGGCAAGCTCTGTAGTCTCAACATTGAAATTGCACATGAGTTGGGAATCTTCGACTGCATTGAAAATAAGAAAAGAAGATCAGTTTTACTCCCTATTACGCTTGCAGTTGTCGGCGCCACTGCTCTGATAGCTACGAGTAATTTTGCTGCAGAGAACTTGATAGGAAAGGGTGGCTTTGGCTATGTGTATAAGGTTGGAGATTTTGGATTAGCGAGGCTTCTTTCTCAGAATCCATCGCAGAGCAGCACACTGGGACTAAAGGGTTCAGTCGGCTATATTGCCCCACGAGGAAAAGCTTCAACTCGTGGGGACGTGTATACCTTTGGGATCCTATTGCTAGAGATGTTCATAGCGAGAAGACCAACCGATGAGATGTTCCATGACGGCTTAAGCTTAAACAAATTGGCTTCAAGCATGACAGAGAGTAATCAAGTCATGAAGGTGGTTGATCCGAGGCTTTTTAAGGATTATGATCATTCGAGAAACAGCTCATGGGCAAGTAAAGCAGAGGAGTGCTTAGGAGGCGTAATAGGAATAGGGTTGTCATGCGCAACTCGAGGGGCCAATGATCGTTTGAGCATGAGAGAGGCATCGACAAAACTGCAAGGAATCAAGCACTCTTTGCTGTCTCTGTGA 2109 0.449 MNMKHIHLPLLLCFFLLLHLHGILCKKEASLNKDTDKDALLSFKSVISDPNKALSDWSSTSDSSHCNWHGVSCSKVGSRVQSLSLPGLGLSGKLPSSLSNLSYLHLLDLSNNSFHGQIPPQFSRLSLLNMLSLAFNNLSGTLPPQLGLLHRLQFLDLSINSLTGPLPRHFGNLSSLTGLFLARNHLLGKIPSELGNLCNLSHLHLFDNYFSGDFPFRIFNIYSLVFLSVTSNHLSGKLPQDIGHSLSNLKGLFLANNRFGGEISSSISNASQLHDLDLSNNEFHGWVPLFNNMNELTYLNLGRNHFSSTSLRNSQLFGSLGNSTQLQFLKLHNNRLAGELPSSAANLSSNLQHFCVAGNSLSGRIPLGMGKFRNLEFLTLESNFFTGEIPTDIGALHKLVQLVAYHNRLSGEIPNILGNFTQLSIFDLGYNQFAGNALHGPFPSEVNSLQQLQFMDISDNQLSGFIPKEIGGEVPMKGVFTNSSQVAVQGNGKLCSLNIEIAHELGIFDCIENKKRRSVLLPITLAVVGATALIATSNFAAENLIGKGGFGYVYKVGDFGLARLLSQNPSQSSTLGLKGSVGYIAPRGKASTRGDVYTFGILLLEMFIARRPTDEMFHDGLSLNKLASSMTESNQVMKVVDPRLFKDYDHSRNSSWASKAEECLGGVIGIGLSCATRGANDRLSMREASTKLQGIKHSLLSL 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1432 702 Pfam Leucine rich repeat N-terminal domain 34 74 IPR013210 -
Dere05g1432 702 Gene3D Ribonuclease Inhibitor 290 504 IPR032675 -
Dere05g1432 702 Gene3D Transferase(Phosphotransferase) domain 1 534 700 - -
Dere05g1432 702 SUPERFAMILY Protein kinase-like (PK-like) 553 693 IPR011009 -
Dere05g1432 702 SUPERFAMILY L domain-like 245 468 - -
Dere05g1432 702 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 71 317 - -
Dere05g1432 702 SUPERFAMILY L domain-like 35 308 - -
Dere05g1432 702 ProSiteProfiles Protein kinase domain profile. 361 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1432 702 Pfam Protein tyrosine and serine/threonine kinase 551 619 IPR001245 GO:0004672|GO:0006468
Dere05g1432 702 Gene3D Ribonuclease Inhibitor 32 183 IPR032675 -
Dere05g1432 702 Gene3D Ribonuclease Inhibitor 184 289 IPR032675 -
Dere05g1432 702 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 556 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1432 Dere-ChrDere05 23547737 23550802 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1432 556 701 Receptor kinase-like Gene Family AT5G20480 32.903 1.28e-15 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Dere05g1432 PK_Tyr_Ser-Thr 4.2e-07 CL0016