Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1431 ATGTATATAATGCAGAAGAGGGAAAAACGAAGATGGATTTTCAGGAAGCCGTTTAGTCAAGAAATAGTTGGTACTCAGATTTGCGAAGAAAGAACTATAACCACCGTTGCTGATGTTATAACAACAACAAATAATAATGTGTCTGAGGTATTTGATGCTGATCAGCAAAGACTCGCCATTGCAGTAGCCATGGCAACCACAGCAGCTACTCAGGCAAAAGTAGCATCTGCTCAAGCAGCTGTGGAGGTCGTTCGGCTTGCAAGGCCTTCCATCTTTGTTAAACACCATTTTGCTGCCACTATTATTCAAACAGCCTTCAGAGGTTATCTGGCGAGAAGAGCGCTTCGGGCACTTAAAGGGTTAGTGAAGCTGCAGGCATTAGTGAGAGGTCAAAGTGTCCTCAAAAGAGCAAAATTTACTCTTCAATGCATGCAAGCTCTTGTTCGAGTTCAGACTCGGCTATGTGAACAGCGAGCTAAGAGTATTTCCCATGAAGGAAGCTCATGTTCCAGAAAAAGTGATGATCCCTCTAATTTATGGAGGTCACATTTGGCAGATAGCAACTCCATTTCTAGAGACGATGAAACACAAAAACTAAATAAGATTCGAGCTGTTCTAAAGAAAACGAAGGAAGATGCCTTGAAACGAGAAGAGGCCCTAGCTGATGCTTTCTCTCACCAGATATGGAGAACTAGAGGGGACCCCAGCGTCAGTGAAGGAGAGGTTGAGGATGATTCTAGATGTTCTGATGAATGGAGAAGAAGAAGAAGAAGCTTGTACAGAGAGAGCACCGGTAGAGCTTTGTGTGATCAAAGAGACCCTATCAAGATAGTTGAAATAGACACCTTCAAACCTTACTCCAACATAGTTCCCCCTGATACGATGAGATCATTTTGTGGTTATAAGCCTCAGTTAAATACTCCACTAAGAAGCCACACACTTCCTTTGTCTTCACCTGTGCATAAAGCCCATTGTGAGGTCTCTTTTCAGCCTCCATTAGTGACACCATCACCAACAAAGACGAAGCATCTTCAGGTGCATTCAGCTAGTCCTCGTTGCACAAAATATTTATAG 1074 0.4302 MYIMQKREKRRWIFRKPFSQEIVGTQICEERTITTVADVITTTNNNVSEVFDADQQRLAIAVAMATTAATQAKVASAQAAVEVVRLARPSIFVKHHFAATIIQTAFRGYLARRALRALKGLVKLQALVRGQSVLKRAKFTLQCMQALVRVQTRLCEQRAKSISHEGSSCSRKSDDPSNLWRSHLADSNSISRDDETQKLNKIRAVLKKTKEDALKREEALADAFSHQIWRTRGDPSVSEGEVEDDSRCSDEWRRRRRSLYRESTGRALCDQRDPIKIVEIDTFKPYSNIVPPDTMRSFCGYKPQLNTPLRSHTLPLSSPVHKAHCEVSFQPPLVTPSPTKTKHLQVHSASPRCTKYL 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1431 357 SMART iq_5 94 116 IPR000048 GO:0005515
Dere05g1431 357 PANTHER IQ-DOMAIN 5-RELATED 8 313 - -
Dere05g1431 357 ProSiteProfiles IQ motif profile. 95 123 IPR000048 GO:0005515
Dere05g1431 357 Coils Coil 192 212 - -
Dere05g1431 357 Gene3D - 93 147 - -
Dere05g1431 357 Pfam IQ calmodulin-binding motif 98 116 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1431 Dere-ChrDere05 23540492 23541819 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1431 10 355 IQD Protein Family AT4G00820 36.585 8.58e-51 175