Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1429 ATGGAGCAACTTCAGTACATTGACGTGTCTAACAATGTTATGACAGGATATATTCCCAAAGAAATAGATGACTGTGCAAGCTTGTTGTCGCTTGTATTAGCAAGAAACCACTTCAATGGTTCAATCCCAATCACTCTGGGGAATTTAAAATTGTTGGAATCATTGGATTTATCTTCCAACAACCTTTCTGGTTCCATCCCTGTAACTTTGGAAAAGCTCCAATATATAGAGAAGTTGAATTTGTCTTTCAACCATTTGGAAGGCGAAGTTATTATTAAAGGAAACAGTAGGTTAAGCTTTGTTGATAAGGATGTGTTCAGAATCAATCAATGTGAAACTACCCATGTGGTGAAGTTCCTCAACTTGAAACAAAGCAAAGCCTCTCGGAGTTTTAATTCAGAGTGTGAAGCTCTGAAGAATGTTAGGCATAAGAACCCTGTGAAGCTTATCACTTCTTGCTTTAGCATTGATTATAAAGGAGATGATTTTAAGGCCCTGGTTATGCAATTCATGGCCAACGACATTGCTAGTGCTATGGACTATTTGCACCATGATTGTAACCCACCAGTAGTCCATTGCGATCTGAAACCTGGTAATGTCATATTAGATGAAAATATGATTACACATGTTGGGGATTTTGGATTAGCAAGGCTTCTTTCTCAGAATTCATTGGAGTCTACCACTTTGGCACTGAAGGGTACCATTGGCTAA 711 0.384 MEQLQYIDVSNNVMTGYIPKEIDDCASLLSLVLARNHFNGSIPITLGNLKLLESLDLSSNNLSGSIPVTLEKLQYIEKLNLSFNHLEGEVIIKGNSRLSFVDKDVFRINQCETTHVVKFLNLKQSKASRSFNSECEALKNVRHKNPVKLITSCFSIDYKGDDFKALVMQFMANDIASAMDYLHHDCNPPVVHCDLKPGNVILDENMITHVGDFGLARLLSQNSLESTTLALKGTIG 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1429 236 PANTHER OS04G0122200 PROTEIN 1 95 - -
Dere05g1429 236 Gene3D Transferase(Phosphotransferase) domain 1 105 236 - -
Dere05g1429 236 FunFam Piriformospora indica-insensitive protein 2 1 92 - -
Dere05g1429 236 SUPERFAMILY L domain-like 2 123 - -
Dere05g1429 236 Pfam Leucine rich repeat 30 86 IPR001611 GO:0005515
Dere05g1429 236 Gene3D Ribonuclease Inhibitor 1 104 IPR032675 -
Dere05g1429 236 SUPERFAMILY Protein kinase-like (PK-like) 111 235 IPR011009 -
Dere05g1429 236 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Dere05g1429 236 Pfam Protein kinase domain 115 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere05g1429 236 PRINTS Leucine-rich repeat signature 73 86 - -
Dere05g1429 236 PRINTS Leucine-rich repeat signature 52 65 - -
Dere05g1429 236 ProSiteProfiles Protein kinase domain profile. 52 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere05g1429 Dere-ChrDere05 23460112 23461242 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere05g1429 1 95 Receptor kinase-like Gene Family AT3G47570 31.250 5.05e-07 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Dere05g1429 Pkinase 4.8e-13 CL0016