Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere05g1414 ATGCATAAACCAACCTTAGTCATGCTATGTGTGCTTACGAGCTTGTTTTTTGTTTCAGGGATGCTGGTCTCCTTCTTTCGAGAAATCGGTCTGGGTTATGAGGAAACCCAAATGCTGTTGGACCATCATCCTGAGCTTGCAATGATGTCTCTGGATTCATTGCGTGCTCGGGTTAATTCTTTACGGTCTATTATTGGGTTTGATCGTCTTGCTCTACTTAACTTAGTTACAAAGCGTCCAACCGTACTAACGGCTAAGGAAATTGACGATTTGATCCGTTTTTTGCGGGAAGAATTGGAAGGACAGCTACAGCAAGCACAGATGAAGCGCCTATTATCTGGTACTGAACCAAGATTTTTTGTGGGTTTTGATCAAAAGGTCAAACTGCTTCTCAACCGAGGAGTTCCCCGTGAAAAGATTGTCCATGTGCTCAATAATGTGAATTTGACAAAGGCACTGTGTCATAGGTCTGTGGACGAGATTGATAGGACAATAGATTTCTTAAACCCCTTTGGTGGCATTAATCTAATTGTAAGGCGTCCTGCAATTTTCAATTATGATTTAGATAATCAGCTGATTCCAAGAACCAATTTTTTGATTGACCTTAGTGGAGGGGACGAGGATGGCACTGGGAAGGTGTTGCGTAAACTGCCGGCTATTTTGAGTTACCGTGTGGAGCATATGGAGGGCCATGTAGAGTTCCTGAGGTCTTTTGCAGGCCTGAATGATCGAGAAATATTTCGAATAATACTGGTTTTTCCTAGTATTGTCAGTGCTAGCAGAGAGAGGAAGCTGCGTCCTCGAATAGAGTTTCTCAAGGAATGTGGGTTGAATTCGGATGAAATCTTCAAGTTCTTGATAAAAGCTCCTTTGTTTCTTGGCCATTCATATCATGAGAACATTGCGTATAAACTAGTGTTTCTGGTCAAGATTGGGTATAAATATAGGACAAAGGACTTGGCAATGGCAATTGGATCTACCACTAGGACAAGCTGTGAGAACTTGCAAATGGTGATTGATCTATTCTTGACTTATGGGTTTTCATGCGAAGACCTTGTTGTTATGAGCAAGACGCATCCTCAGATACTACAGTACAATCATATATCTTTAGAGAAGAAGATGAAGTACTTAATGGAGGAAATGGGTCGCGATATTGAGGAATTACTGGTGTTTCCTGCGTTCCTTGGTTACAAGCTAGATGACAGAATTAAGCAAAGGTTTGAAGAAAAGAGGAGTAAGAGGGGAGAAGGAATGTCTCTCAATAAGCTTTTAACTGTTTCAACTGAGAGATTCGCTGGGAAAAGAAAGAAGGCCTCTGCAGCTCATGGAATAGAAATTATTAATGCTGAAGGTCAATAA 1359 0.4121 MHKPTLVMLCVLTSLFFVSGMLVSFFREIGLGYEETQMLLDHHPELAMMSLDSLRARVNSLRSIIGFDRLALLNLVTKRPTVLTAKEIDDLIRFLREELEGQLQQAQMKRLLSGTEPRFFVGFDQKVKLLLNRGVPREKIVHVLNNVNLTKALCHRSVDEIDRTIDFLNPFGGINLIVRRPAIFNYDLDNQLIPRTNFLIDLSGGDEDGTGKVLRKLPAILSYRVEHMEGHVEFLRSFAGLNDREIFRIILVFPSIVSASRERKLRPRIEFLKECGLNSDEIFKFLIKAPLFLGHSYHENIAYKLVFLVKIGYKYRTKDLAMAIGSTTRTSCENLQMVIDLFLTYGFSCEDLVVMSKTHPQILQYNHISLEKKMKYLMEEMGRDIEELLVFPAFLGYKLDDRIKQRFEEKRSKRGEGMSLNKLLTVSTERFAGKRKKASAAHGIEIINAEGQ 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere05g1414 452 Coils Coil 85 105 - -
Dere05g1414 452 PANTHER CGI-12 PROTEIN-RELATED 23 202 IPR003690 GO:0003690|GO:0006355
Dere05g1414 452 SMART mt_12 211 242 IPR003690 GO:0003690|GO:0006355
Dere05g1414 452 SMART mt_12 37 68 IPR003690 GO:0003690|GO:0006355
Dere05g1414 452 SMART mt_12 174 205 IPR003690 GO:0003690|GO:0006355
Dere05g1414 452 SMART mt_12 283 314 IPR003690 GO:0003690|GO:0006355
Dere05g1414 452 SMART mt_12 353 384 IPR003690 GO:0003690|GO:0006355
Dere05g1414 452 SMART mt_12 385 416 IPR003690 GO:0003690|GO:0006355
Dere05g1414 452 SMART mt_12 247 278 IPR003690 GO:0003690|GO:0006355
Dere05g1414 452 SMART mt_12 73 102 IPR003690 GO:0003690|GO:0006355
Dere05g1414 452 Pfam mTERF 24 273 IPR003690 GO:0003690|GO:0006355
Dere05g1414 452 Pfam mTERF 265 432 IPR003690 GO:0003690|GO:0006355
Dere05g1414 452 Gene3D Transcription termination factor 3, mitochondrial 20 204 IPR038538 -
Dere05g1414 452 Gene3D Transcription termination factor 3, mitochondrial 205 441 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dere05g1414 mTERF 1e-18 No_clan